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Protein Alignment ReepB and reep6
DIOPT Version :9
Sequence 1: | NP_001188928.1 |
Gene: | ReepB / 36569 |
FlyBaseID: | FBgn0033906 |
Length: | 178 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_009304084.1 |
Gene: | reep6 / 447918 |
ZFINID: | ZDB-GENE-040912-98 |
Length: | 213 |
Species: | Danio rerio |
Alignment Length: | 168 |
Identity: | 75/168 - (44%) |
Similarity: | 107/168 - (63%) |
Gaps: | 12/168 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 QVKQFLNGYKDDVSKSLRDASKPWTKVFDTVEEKTGVDRVNIFVGAVGLCAIYLIFGWGAQLLCN 68
:|:.||| .|:: .|...:.:|||||:.:..:..||.|:...:|:.|:||.|:||
Zfish 11 RVEAFLN------EKNI------VTDCLNKIEEKTGIKKRYLAYGAAGVTGAFLLLGYGASLICN 63
Fly 69 IIGVLYPAYISIHAIESSTKQDDTKWLIYWVTFGIFTVIEFFSSLLTSVIPFYWLLKCAFLIWCM 133
:||.:||||.||.||||..|:|||:||.|||.:|.|:|.||||.:.....|||::.||.||:|||
Zfish 64 LIGFVYPAYFSIKAIESPGKEDDTQWLTYWVIYGFFSVGEFFSDIFLHWFPFYYVCKCLFLLWCM 128
Fly 134 LPTEQNGSTIIYNKLVRPYFLKHHESVDRIIDDGMKKA 171
.|...|||.::|..:|||:||||..:||.::.:...||
Zfish 129 APVSWNGSQVLYRHVVRPFFLKHEAAVDGMVSNISVKA 166
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
117 |
1.000 |
Domainoid score |
I5859 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
179 |
1.000 |
Inparanoid score |
I4006 |
OMA |
1 |
1.010 |
- |
- |
|
QHG57200 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1473891at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000849 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
mtm6434 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_100903 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR12300 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2369 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X536 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
12 | 12.010 |
|
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