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Protein Alignment ReepB and Reep4
DIOPT Version :9
Sequence 1: | NP_001188928.1 |
Gene: | ReepB / 36569 |
FlyBaseID: | FBgn0033906 |
Length: | 178 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001020450.1 |
Gene: | Reep4 / 306014 |
RGDID: | 1306561 |
Length: | 257 |
Species: | Rattus norvegicus |
Alignment Length: | 104 |
Identity: | 35/104 - (33%) |
Similarity: | 63/104 - (60%) |
Gaps: | 5/104 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 65 LLCNII----GVLYPAYISIHAIESSTKQDDTKWLIYWVTFGIFTVIEFFSSLLTSVIPFYWLLK 125
::|.:: |:|||||.|..|::|...::..:|::||:.|.||...|.|:.:..|..|||:.:|
Rat 5 MICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEIK 69
Fly 126 CAFLIWCMLPTEQNGSTIIYNKLVRPYFLKHHESVDRII 164
.||::|.:.|..: |::::|.|.|.|...:|.:.:|..|
Rat 70 MAFVLWLLSPYTK-GASLLYRKFVHPSLSRHEKEIDACI 107
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5052 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1473891at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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