DRSC/TRiP Functional Genomics Resources

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Protein Alignment ReepB and REEP3

DIOPT Version :9

Sequence 1:NP_001188928.1 Gene:ReepB / 36569 FlyBaseID:FBgn0033906 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001001330.1 Gene:REEP3 / 221035 HGNCID:23711 Length:255 Species:Homo sapiens


Alignment Length:118 Identity:39/118 - (33%)
Similarity:66/118 - (55%) Gaps:16/118 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 AIYLIFGWGAQLLCNIIGVLYPAYISIHAIESSTKQDDTKWLIYWVTFGIFTVIEFFSSLLTSVI 118
            |:.|:|           |:|||||.|..|:::...::..:|::||:.|.::||||..:....:..
Human     9 AVVLVF-----------GMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVAWF 62

  Fly   119 PFYWLLKCAFLIWCMLPTEQNGSTIIYNKLVRPYFLKHHESVDRIIDDGMKKA 171
            |.|:.||.||:||.:.|..: |:::||.|.:.|..    .|.:|.|||.:.:|
Human    63 PLYYELKIAFVIWLLSPYTK-GASLIYRKFLHPLL----SSKEREIDDYIVQA 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepBNP_001188928.1 TB2_DP1_HVA22 63..151 CDD:281172 29/87 (33%)
REEP3NP_001001330.1 TB2_DP1_HVA22 19..95 CDD:308643 26/76 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..242
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1473891at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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