DRSC/TRiP Functional Genomics Resources

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Protein Alignment ReepB and F56B3.6

DIOPT Version :10

Sequence 1:NP_610936.2 Gene:ReepB / 36569 FlyBaseID:FBgn0033906 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_499990.1 Gene:F56B3.6 / 176906 WormBaseID:WBGene00018930 Length:205 Species:Caenorhabditis elegans


Alignment Length:137 Identity:54/137 - (39%)
Similarity:79/137 - (57%) Gaps:4/137 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KVFDTV---EEKTGVDRVNIFVGAVGLCAIYLIFGWGAQLLCNIIGVLYPAYISIHAIESSTKQD 90
            ::||..   .|..|..|.::...|.||.|.:|:||..|:||||:||..||.|.|:.||.|....|
 Worm    63 QIFDMAMMYAESAGFKRDHLSYAAFGLIAFFLVFGSVARLLCNLIGFGYPTYASVKAIRSPGGDD 127

  Fly    91 DTKWLIYWVTFGIFTVIEFFSSLLTSVIPFYWLLKCAFLIWCMLPTEQNGSTIIYNKLVRPYFLK 155
            ||.|||||..|.:..:::|||..:.|..|||::.|..||::..||..| ||.:.|..:|.|..:.
 Worm   128 DTVWLIYWTCFAVLYLVDFFSEAILSWFPFYYIAKACFLVYLYLPQTQ-GSVMFYETIVDPLVIF 191

  Fly   156 HHESVDR 162
            ..:::|:
 Worm   192 VDKNLDK 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepBNP_610936.2 TB2_DP1_HVA22 75..152 CDD:460820 32/76 (42%)
F56B3.6NP_499990.1 TB2_DP1_HVA22 112..188 CDD:460820 32/76 (42%)

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