DRSC/TRiP Functional Genomics Resources

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Protein Alignment ReepB and Reep5

DIOPT Version :9

Sequence 1:NP_001188928.1 Gene:ReepB / 36569 FlyBaseID:FBgn0033906 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_031900.3 Gene:Reep5 / 13476 MGIID:1270152 Length:189 Species:Mus musculus


Alignment Length:144 Identity:77/144 - (53%)
Similarity:104/144 - (72%) Gaps:0/144 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 TKVFDTVEEKTGVDRVNIFVGAVGLCAIYLIFGWGAQLLCNIIGVLYPAYISIHAIESSTKQDDT 92
            |.:...:|.||||:|..|.:|.:||.|:||:||:||.||||:||..||||||:.||||..|.|||
Mouse    20 TDLLAKLEAKTGVNRSFIALGVIGLVALYLVFGYGASLLCNLIGFGYPAYISMKAIESPNKDDDT 84

  Fly    93 KWLIYWVTFGIFTVIEFFSSLLTSVIPFYWLLKCAFLIWCMLPTEQNGSTIIYNKLVRPYFLKHH 157
            :||.|||.:|:|::.||||.|..|..|||::|||.||:|||.|:..||:.::|.:::||.||||.
Mouse    85 QWLTYWVVYGVFSIAEFFSDLFLSWFPFYYMLKCGFLLWCMAPSPANGAEMLYRRIIRPIFLKHE 149

  Fly   158 ESVDRIIDDGMKKA 171
            ..||.::.|...||
Mouse   150 SQVDSVVKDVKDKA 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepBNP_001188928.1 TB2_DP1_HVA22 63..151 CDD:281172 49/87 (56%)
Reep5NP_031900.3 TB2_DP1_HVA22 55..143 CDD:281172 49/87 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849930
Domainoid 1 1.000 110 1.000 Domainoid score I6307
eggNOG 1 0.900 - - E1_COG5052
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68479
Inparanoid 1 1.050 177 1.000 Inparanoid score I4021
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57200
OrthoDB 1 1.010 - - D1473891at2759
OrthoFinder 1 1.000 - - FOG0000849
OrthoInspector 1 1.000 - - mtm8791
orthoMCL 1 0.900 - - OOG6_100903
Panther 1 1.100 - - LDO PTHR12300
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2369
SonicParanoid 1 1.000 - - X536
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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