DRSC/TRiP Functional Genomics Resources

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Protein Alignment ReepB and reep2

DIOPT Version :9

Sequence 1:NP_001188928.1 Gene:ReepB / 36569 FlyBaseID:FBgn0033906 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001090762.1 Gene:reep2 / 100037847 XenbaseID:XB-GENE-961347 Length:266 Species:Xenopus tropicalis


Alignment Length:109 Identity:38/109 - (34%)
Similarity:62/109 - (56%) Gaps:1/109 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 AQLLCNIIGVLYPAYISIHAIESSTKQDDTKWLIYWVTFGIFTVIEFFSSLLTSVIPFYWLLKCA 127
            ::|:..|.|.|||||.|..|:::...::..||::||:.|..||..|..:.::.|..|||:.||.|
 Frog     7 SRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIILSWFPFYFELKIA 71

  Fly   128 FLIWCMLPTEQNGSTIIYNKLVRPYFLKHHESVDRIIDDGMKKA 171
            |:||.:.|..: ||:::|.|.|.|......:.:|..|.....|:
 Frog    72 FVIWLLSPYTK-GSSVLYRKFVHPTLSSKEKEIDEYIAQARDKS 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ReepBNP_001188928.1 TB2_DP1_HVA22 63..151 CDD:281172 34/87 (39%)
reep2NP_001090762.1 TB2_DP1_HVA22 19..94 CDD:367349 29/75 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1473891at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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