DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18324 and Slc25a27

DIOPT Version :10

Sequence 1:NP_725361.1 Gene:CG18324 / 36568 FlyBaseID:FBgn0033905 Length:307 Species:Drosophila melanogaster
Sequence 2:XP_006244672.1 Gene:Slc25a27 / 85262 RGDID:620787 Length:365 Species:Rattus norvegicus


Alignment Length:303 Identity:92/303 - (30%)
Similarity:149/303 - (49%) Gaps:18/303 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SDFVLGGTAAMGAVVFTNPIDVVKTRMQLQGE--LAARGTYV---KPYRHLPQAMLQIVLNDGLL 63
            |.|:|.|.||..|.:.|.|:|:.|||:|:|||  ||..|...   .|||.:.:..|.||..:|.|
  Rat    20 SKFLLSGCAATVAELATFPLDLTKTRLQMQGEAALAKLGDGAMESAPYRGMMRTALGIVQEEGFL 84

  Fly    64 ALEKGLAPALCYQFVLNSVRLSVYSNALELGYLQNADGSISFYRGMFFGALGGCTGTYFASPFYM 128
            .|.:|:.||:....|.:..|:..|.:..|:.:.::.|.....::.:..|.:.|..|.:.|:|..:
  Rat    85 KLWQGVTPAIYRHVVYSGGRMVTYEHLREVVFGKSEDEHYPLWKSVIGGMMAGVIGQFLANPTDL 149

  Fly   129 IKAQQHAQAVQSIAVGFQHKHTSMMDALLHIYRTNGISGFWRAALPSLNRTLVASSVQIGTFPKA 193
            :|.|...:..:.:. |...:...:..|...|....||.|.|...:|::.|..:.:...:.|:...
  Rat   150 VKVQMQMEGKRRLE-GKPLRFRGVHHAFAKILAEGGIRGLWAGWIPNIQRAALVNMGDLTTYDTV 213

  Fly   194 KSLL-----KDKGWITHPVLLSFCAGLSSGTLVAVANSPFDVLTTRMYNQPVDEKGRGLMYKGLV 253
            |..|     .:....||. |.|.|:||    :.::..:|.||:.:|:.|||.|::||||:||...
  Rat   214 KHYLVLNTALEDNIATHG-LSSLCSGL----VASILGTPADVIKSRIMNQPRDKQGRGLLYKSST 273

  Fly   254 DCFTKIWRTEGIHGMYKGFWPIYFRSAPHTTLTFVFFEKLLHL 296
            ||..:..:.||...:||||.|.:.|..  .|..|.||...|::
  Rat   274 DCVIQAVQGEGFLSLYKGFLPSWLRMV--KTGRFCFFLCFLYI 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18324NP_725361.1 Mito_carr 4..87 CDD:395101 34/87 (39%)
Mito_carr 101..201 CDD:395101 19/104 (18%)
Mito_carr 204..296 CDD:395101 36/91 (40%)
Slc25a27XP_006244672.1 Mito_carr 20..119 CDD:395101 36/98 (37%)
Mito_carr 122..218 CDD:395101 18/96 (19%)
Mito_carr 224..311 CDD:395101 35/93 (38%)

Return to query results.
Submit another query.