DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18324 and colt

DIOPT Version :10

Sequence 1:NP_725361.1 Gene:CG18324 / 36568 FlyBaseID:FBgn0033905 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster


Alignment Length:304 Identity:71/304 - (23%)
Similarity:117/304 - (38%) Gaps:47/304 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FVLGGTAAMGAVVFTNPIDVVKTRMQLQGELAA------RGTYVKPYRHLPQAMLQIVLNDGLLA 64
            |:.||...:..|:..:|:|.:|.|:|.....|.      |||:        ....:.:.|:|:..
  Fly    19 FLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTF--------DCAAKTIKNEGVRG 75

  Fly    65 LEKGL-------AP--ALCYQFVLNSVRLSVYSNALELGYLQNADGSISFYRGMFFGALGGCTGT 120
            |.||:       ||  |:|:.......||.......:|.|.|      .|..|.|    .|...|
  Fly    76 LYKGMSAPLTGVAPIFAMCFAGYALGKRLQQR
GEDAKLTYPQ------IFVAGSF----SGLFST 130

  Fly   121 YFASPFYMIKAQQHAQAVQSIAVGFQHKHTSMMDALLHIYRTNGISGFWRAALPSLNRTLVASSV 185
            ...:|...||.....|..|    |.:.|:..|:|....:|:..|:...::.:..::.|.|.|:.:
  Fly   131 LIMAPGERIKVLLQTQQGQ----GGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGL 191

  Fly   186 QIGTFPKAKSLLKDK---GWITHPVLLSFCAGLSSGTLVAVANSPFDVLTTRMYNQPVDEKGRGL 247
            ....:...:.:.|.|   |.|:  ...:..||..:|....:...|.|||.:|:.:.|     .|.
  Fly   192 YFLVYEALQDV
AKSKSETGQIS--TASTIFAGGVAGMAYWILGMPADVLKSRLQSAP-----EGT 249

  Fly   248 MYKGLVDCFTKIWRTEGIHGMYKGFWPIYFRSAPHTTLTFVFFE 291
            ...|:...|..:...:|...:|:|..||..|:.|.....|...|
  Fly   250 YKHGIRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIE 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18324NP_725361.1 Mito_carr 4..87 CDD:395101 24/95 (25%)
Mito_carr 101..201 CDD:395101 21/102 (21%)
Mito_carr 204..296 CDD:395101 21/88 (24%)
coltNP_477221.1 Mito_carr 12..107 CDD:395101 24/95 (25%)
Mito_carr 112..202 CDD:395101 22/103 (21%)
Mito_carr 210..299 CDD:395101 23/91 (25%)

Return to query results.
Submit another query.