DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18324 and colt

DIOPT Version :9

Sequence 1:NP_725361.1 Gene:CG18324 / 36568 FlyBaseID:FBgn0033905 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster


Alignment Length:304 Identity:71/304 - (23%)
Similarity:117/304 - (38%) Gaps:47/304 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FVLGGTAAMGAVVFTNPIDVVKTRMQLQGELAA------RGTYVKPYRHLPQAMLQIVLNDGLLA 64
            |:.||...:..|:..:|:|.:|.|:|.....|.      |||:        ....:.:.|:|:..
  Fly    19 FLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTF--------DCAAKTIKNEGVRG 75

  Fly    65 LEKGL-------AP--ALCYQFVLNSVRLSVYSNALELGYLQNADGSISFYRGMFFGALGGCTGT 120
            |.||:       ||  |:|:.......||.......:|.|.|      .|..|.|    .|...|
  Fly    76 LYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQ------IFVAGSF----SGLFST 130

  Fly   121 YFASPFYMIKAQQHAQAVQSIAVGFQHKHTSMMDALLHIYRTNGISGFWRAALPSLNRTLVASSV 185
            ...:|...||.....|..|    |.:.|:..|:|....:|:..|:...::.:..::.|.|.|:.:
  Fly   131 LIMAPGERIKVLLQTQQGQ----GGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGL 191

  Fly   186 QIGTFPKAKSLLKDK---GWITHPVLLSFCAGLSSGTLVAVANSPFDVLTTRMYNQPVDEKGRGL 247
            ....:...:.:.|.|   |.|:  ...:..||..:|....:...|.|||.:|:.:.|     .|.
  Fly   192 YFLVYEALQDVAKSKSETGQIS--TASTIFAGGVAGMAYWILGMPADVLKSRLQSAP-----EGT 249

  Fly   248 MYKGLVDCFTKIWRTEGIHGMYKGFWPIYFRSAPHTTLTFVFFE 291
            ...|:...|..:...:|...:|:|..||..|:.|.....|...|
  Fly   250 YKHGIRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIE 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18324NP_725361.1 Mito_carr 4..87 CDD:278578 24/95 (25%)
PTZ00169 5..293 CDD:240302 71/304 (23%)
Mito_carr 101..201 CDD:278578 21/102 (21%)
Mito_carr 204..296 CDD:278578 21/88 (24%)
coltNP_477221.1 Mito_carr 12..107 CDD:395101 24/95 (25%)
Mito_carr 112..202 CDD:395101 22/103 (21%)
Mito_carr 210..299 CDD:395101 23/91 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441288
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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