DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18324 and CG5254

DIOPT Version :10

Sequence 1:NP_725361.1 Gene:CG18324 / 36568 FlyBaseID:FBgn0033905 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster


Alignment Length:318 Identity:81/318 - (25%)
Similarity:125/318 - (39%) Gaps:66/318 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GGTAAMGAVVFTNPIDVVKTRMQLQ----------GELAARGT---YVKPYRHLPQAMLQIVLND 60
            ||:|....|....|:||||||:|:|          ||:...|.   :.|.|||           :
  Fly    21 GGSAGFLEVCIMQPLDVVKTRIQIQATPAPNAAALGEVHYNGVFDCFAKMYRH-----------E 74

  Fly    61 GLLALEKGLAPALCYQFVLNSVRLSVYSNALELGYLQNADGSISFYRG------MFFGALGGCTG 119
            |:.:..||:.|.:..:....:::..|:.....|           |..|      :.|...|...|
  Fly    75 GISSYWKGIMPPILAETPKRAIKFLVFEQTKPL-----------FQFGS
PTPTPLTFSLAGLTAG 128

  Fly   120 TYFA---SPFYMIKAQQHA----QAVQSIAVGFQHKHTSMMDALLHIYRTNGISGFWRAALPSLN 177
            |..|   :||.::|..|.|    :.:.:.||.   |.....|.|       |.||..:....::.
  Fly   129 TLEAIAVNPFEVVKVAQQADRQKKMLSTFAVA---KGIIQQDGL-------GFSGLNKGITATMG 183

  Fly   178 RTLVASSVQIGTFPKAKSLLKDKGWITHPVLLSFCAGLSSGTLVAVANSPFDVLTTRMYN-QPVD 241
            |..|.:.|..|.:...|:::.:........|.....|..:|||....|.||||..:|:.. |||.
  Fly   184 RNGVFNMVYFGFYHSVKNVVPEYK
ESHLEFLRKVTIGFLAGTLACFVNIPFDVAKSRIQGPQPVP 248

  Fly   242 EKGRGLMYKGLVDCFTKIWRTEGIHGMYKGFWPIYFRSAPHTTLTFVFFE----KLLH 295
            .:   :.|:|.:.....::|.||...:|||..|...|..|...:..:.||    .|||
  Fly   249 GQ---IKYRGTLSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYDYLLH 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18324NP_725361.1 Mito_carr 4..87 CDD:395101 24/90 (27%)
Mito_carr 101..201 CDD:395101 25/112 (22%)
Mito_carr 204..296 CDD:395101 30/97 (31%)
CG5254NP_569856.2 Mito_carr 18..112 CDD:395101 27/112 (24%)
Mito_carr 122..207 CDD:395101 22/94 (23%)
Mito_carr 209..305 CDD:395101 30/98 (31%)

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