DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18324 and Ucp3

DIOPT Version :10

Sequence 1:NP_725361.1 Gene:CG18324 / 36568 FlyBaseID:FBgn0033905 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_037299.1 Gene:Ucp3 / 25708 RGDID:3933 Length:308 Species:Rattus norvegicus


Alignment Length:292 Identity:84/292 - (28%)
Similarity:127/292 - (43%) Gaps:19/292 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FVLGGTAAMGAVVFTNPIDVVKTRMQLQGELAARGTYVKPYRHLPQAMLQIVLNDGLLALEKGLA 70
            |:..||||..|.:.|.|:|..|.|:|:|||  ..|.....||.:...:|.:|..:|..:...||.
  Rat    17 FLGAGTAACFADLLTFPLDTAKVRLQIQGE--NPGVQSVQYRGVLGTILTMVRTEGPRSPYSGLV 79

  Fly    71 PALCYQFVLNSVRLSVYSNALELGYLQNADGSISFYRGMFFGALGGCT----GTYFASPFYMIKA 131
            ..|..|....|:|:.:|.:..:....:..|.|....|     .|.|||    ....|.|..::|.
  Rat    80 AGLHRQMSFASIRIGLYDSVKQFYTPKG
TDHSSVAIR-----ILAGCTTGAMAVTCAQPTDVVKV 139

  Fly   132 QQHAQAVQSIAVGFQHKHTSMMDALLHIYRTNGISGFWRAALPSLNRTLVASSVQIGTFPKAKSL 196
            :  .||:..:..|.:.|:...|||...|.|..|:.|.|:...|::.|..:.:..::.|:...|..
  Rat   140 R--FQAMIRLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMVTYDIIKEK 202

  Fly   197 LKDKGWITHPVLLSFCAGLSSGTLVAVANSPFDVLTTRMYNQPVDEKGRGLMYKGLVDCFTKIWR 261
            |.|....|......|.:...:|....|..||.||:.||..|.|   .||   |:..:.|..::..
  Rat   203 LLDS
HLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAP---PGR---YRSPLHCMLRMVA 261

  Fly   262 TEGIHGMYKGFWPIYFRSAPHTTLTFVFFEKL 293
            .||....||||.|.:.|......:.||.:|:|
  Rat   262 QEGPTAFYKGFMPSFLRLGSWNVMMFVTYEQL 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18324NP_725361.1 Mito_carr 4..87 CDD:395101 27/80 (34%)
Mito_carr 101..201 CDD:395101 27/103 (26%)
Mito_carr 204..296 CDD:395101 28/90 (31%)
Ucp3NP_037299.1 Mito_carr 10..107 CDD:395101 28/91 (31%)
Solcar 1 11..102 28/86 (33%)
Mito_carr 109..206 CDD:395101 27/103 (26%)
Solcar 2 111..202 25/97 (26%)
Mito_carr 209..299 CDD:395101 28/91 (31%)
Solcar 3 211..296 27/89 (30%)
Purine nucleotide binding. /evidence=ECO:0000250 275..297 5/19 (26%)

Return to query results.
Submit another query.