DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18327 and PUMP1

DIOPT Version :10

Sequence 1:NP_610934.1 Gene:CG18327 / 36567 FlyBaseID:FBgn0033904 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_190979.1 Gene:PUMP1 / 824578 AraportID:AT3G54110 Length:306 Species:Arabidopsis thaliana


Alignment Length:162 Identity:31/162 - (19%)
Similarity:48/162 - (29%) Gaps:63/162 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 LSASDISCADLLIPDCALPALSAGTLSLLEPIPPASEYDATFWTY--LAVRFVAASMLASTLTIT 216
            |:..|...|..:.||.||..|                     |..  |.|.|:|:  |...:|:.
plant    40 LNGWDAEAAPEVTPDLALQEL---------------------WVAVGLGVGFLAS--LGPPVTVR 81

  Fly   217 DPIALDMVEQHGGDFGREKLYSSVGMAIFTPLTGLMIDAWS---SGSGPTETVYTPAF------- 271
            .|.....|...|.:.|.:                     |.   :..||..||..|..       
plant    82 HPQVTPQVPALGRNCGWQ---------------------WDWELASLGPPVTVRHPQVPPQVPAL 125

  Fly   272 -------YTYDLLLLGSLVSVSLMPIGRKIPS 296
                   :.::|..||..|:|....:..::|:
plant   126 GRNCGWQWDWELASLGPPVTVRHPQVTPQVPA 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18327NP_610934.1 PTZ00169 5..293 CDD:240302 30/157 (19%)
PUMP1NP_190979.1 Mito_carr 7..106 CDD:395101 20/109 (18%)
Mito_carr 110..206 CDD:395101 9/48 (19%)
Mito_carr 210..299 CDD:395101
Blue background indicates that the domain is not in the aligned region.

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