DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18327 and GC1

DIOPT Version :10

Sequence 1:NP_610934.1 Gene:CG18327 / 36567 FlyBaseID:FBgn0033904 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_650134.1 Gene:GC1 / 41448 FlyBaseID:FBgn0260743 Length:321 Species:Drosophila melanogaster


Alignment Length:277 Identity:74/277 - (26%)
Similarity:119/277 - (42%) Gaps:30/277 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GGVAAMGAGVFTNPVEVIKTRIQLQGELAARGSHAQPYKSVFQAFVTVAKNDGILGLQKG----- 68
            ||:|.:.......|::::|||:|.| ::...|.  :.|.|:|..|....|.:|..|:.:|     
  Fly    28 GGIAGIIGVTCVFPLDLVKTRLQNQ-QIGPNGE--RMYNSMFDCFRKTYKAEGYFGMYRGSGVNI 89

  Fly    69 --LAPALCFQFVINSFRLSIYTHAVEKGWVHNNKGEISFAKGMFWGALGGVVGSYCASPFFLIKT 131
              :.|....:...|.:    :.|.:.     ...|::.....|..|.|.|.......:|..|:|.
  Fly    90 LLITPEKAIKLTANDY----FRHKLT-----TKDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKI 145

  Fly   132 QLQ-----AQAAKQIAVGYQHQHASMSDAIRKIYRKNGVFGLWRGSLANVSRATVASAVQIAVFG 191
            |:|     |.|||  ..|...:..|.:....::.:..|:|||::|..|...|....|.:...:|.
  Fly   146 QMQDAGRVAAAAK--LAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFA 208

  Fly   192 QAKSL--LKENGVVTHPTILSFCSGLAAGSFVSLAITPLDVVTTRLYNQGVDAQGRGIYYRGWLD 254
            ....|  .:.:|........||.:||||||..:||:.|.|||.|||  |.:........::|..|
  Fly   209 TLNDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRL--QAIKKADGEKEFKGISD 271

  Fly   255 CVLTILRSEGVYGLYKG 271
            |:...|:.||....:||
  Fly   272 CITKTLKHEGPTAFFKG 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18327NP_610934.1 PTZ00169 5..293 CDD:240302 74/277 (27%)
GC1NP_650134.1 PTZ00169 37..294 CDD:240302 71/268 (26%)

Return to query results.
Submit another query.