DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18327 and CG6893

DIOPT Version :9

Sequence 1:NP_001260966.1 Gene:CG18327 / 36567 FlyBaseID:FBgn0033904 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001369058.1 Gene:CG6893 / 40038 FlyBaseID:FBgn0036807 Length:291 Species:Drosophila melanogaster


Alignment Length:288 Identity:72/288 - (25%)
Similarity:123/288 - (42%) Gaps:33/288 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GGVAAMGAGVFTNPVEVIKTRIQLQGELAARGSHAQPYKSVFQAFVTVAKNDGILGLQKGLAPAL 73
            ||||...|..||.|.::|:.|:.:..:.....|:.|      ||.    :..|.:.|..||:..|
  Fly    21 GGVAGAIAQCFTAPFDLIEARMVVIKKDRGMASNLQ------QAI----RTHGFISLYDGLSAQL 75

  Fly    74 CFQFVINSFRLSIYTHAVEKGWVHNNKGEISFAKGMFWGALGGVVGSYCASPFFLIKTQLQAQAA 138
            ..|....|.|..:|    |.|..|.: ........:...||.|.|.....:|..||.|::|...|
  Fly    76 LRQLTYTSMRFHLY----EMGKEHLD-DPAGLLDKVLVAALAGCVAGVVGTPMELINTRMQVNRA 135

  Fly   139 --KQIAVGYQHQHASMSDAIRKIYRKNGVFGLWRGSLANVSRATVASAVQIAVFGQAKSLLKENG 201
              |:....|:    ::.|.:.::.|:.|...|:.|...:..|:::.:..|.|.:.|||.:..|..
  Fly   136 LPKETRWNYR----NVFDGLYRVTREEGFTKLYSGCFLSFMRSSLITISQNAAYDQAKQIYAEFF 196

  Fly   202 VVTHP-TILSFCSGLAAGSFVSLAITPLDVVTTRLYNQGVDAQGRGIYYRGWLDCVLTILRSEGV 265
            .:.|. |:|...|.:.|.......|.|::.:.   |.:.||:       |..::.:..::|. |.
  Fly   197 HMKHDNTLLHLISSVTAAFVCGPIIKPIENLR---YLRMVDS-------RRLINSISYMMRF-GS 250

  Fly   266 YGLYKGFWPIYLRSAPYSTLVLLFFDEL 293
            .|.::|..|..||..|.:.:..|.|::|
  Fly   251 RGPFRGMVPYVLRMVPNTVITFLSFEQL 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18327NP_001260966.1 Mito_carr 4..87 CDD:278578 22/77 (29%)
PTZ00169 5..293 CDD:240302 71/286 (25%)
Mito_carr 101..201 CDD:278578 24/101 (24%)
Mito_carr 204..296 CDD:278578 22/91 (24%)
CG6893NP_001369058.1 Mito_carr 20..96 CDD:395101 25/88 (28%)
Mito_carr 98..192 CDD:395101 23/97 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441305
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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