DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18327 and ucp-4

DIOPT Version :9

Sequence 1:NP_001260966.1 Gene:CG18327 / 36567 FlyBaseID:FBgn0033904 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_505414.1 Gene:ucp-4 / 179315 WormBaseID:WBGene00006729 Length:324 Species:Caenorhabditis elegans


Alignment Length:312 Identity:98/312 - (31%)
Similarity:158/312 - (50%) Gaps:38/312 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATSDFVLGGVAAMGAGVFTNPVEVIKTRIQLQGELAARGSHAQPYKSVFQAFVTVAKNDGILGL 65
            :||..| |...||:.|...|.|:::.|||:|:......:|       .:.|....:.:.:|.:.|
 Worm    23 IATKYF-LSCTAALVAETVTYPLDITKTRLQIARNKFTKG-------GMVQVTYDIIRREGAMAL 79

  Fly    66 QKGLAPALCFQFVINSFRLSIYTHAVEKGWVHNNKGEISFA--KGMFWGALGGVVGSYCASPFFL 128
            ..|:|||:...::....|:..|...  :....|.:.|.||.  |.|..||..|::..:.|||..|
 Worm    80 WTGVAPAITRHYIYTGIRMGAYEQI--RLLTFNKEVEKSFPLWKSMLCGAFSGLIAQFAASPTDL 142

  Fly   129 IKTQLQAQAAKQIAVGYQHQ---HASMSDAIRKIYRKNGVFGLWRGSLANVSRATVASAVQIAVF 190
            :|.|:|.:..:::    |.|   :...:|..|.:||..|.||||.|.:.|..||.:.:...||.:
 Worm   143 VKVQMQMEGLRRL----QKQPLRYTGATDCFRSLYRTQGFFGLWIGWMPNCQRAALLNMADIATY 203

  Fly   191 GQAKSLLKEN-----GVVTHPTILSFCSGLAAGSFVSLAITPLDVVTTRLYNQ---GVDAQ---G 244
            ...|..|.:|     ..:|| .:.|.|:|||| :.|||   |.|||.||:.:|   .:||:   .
 Worm   204 DSVKHGLIDNFELKDNWLTH-AVASACAGLAA-AIVSL---PSDVVKTRMMDQIRHELDAKMMHK 263

  Fly   245 RGIY---YRGWLDCVLTILRSEGVYGLYKGFWPIYLRSAPYSTLVLLFFDEL 293
            :..:   |:|.:||.:.|:::||.:.|||||.|.|:|.||:|....:.::|:
 Worm   264 KNTHVDLYKGVVDCYIKIIKNEGFFSLYKGFLPSYIRMAPWSLTFWVSYEEI 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18327NP_001260966.1 Mito_carr 4..87 CDD:278578 20/82 (24%)
PTZ00169 5..293 CDD:240302 95/306 (31%)
Mito_carr 101..201 CDD:278578 35/109 (32%)
Mito_carr 204..296 CDD:278578 39/99 (39%)
ucp-4NP_505414.1 PTZ00169 20..317 CDD:240302 98/312 (31%)
Mito_carr 22..111 CDD:278578 23/97 (24%)
Mito_carr 115..214 CDD:278578 33/102 (32%)
Mito_carr <240..318 CDD:278578 28/76 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1013743at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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