DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18327 and misc-1

DIOPT Version :9

Sequence 1:NP_001260966.1 Gene:CG18327 / 36567 FlyBaseID:FBgn0033904 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_493694.2 Gene:misc-1 / 173414 WormBaseID:WBGene00015186 Length:306 Species:Caenorhabditis elegans


Alignment Length:298 Identity:82/298 - (27%)
Similarity:148/298 - (49%) Gaps:13/298 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FVLGGVAAMGAGVFTNPVEVIKTRIQLQGELAARGSHAQPYKSVFQAFVTVAKNDGILGLQKGLA 70
            |..||.|.|||.:...|::::|.|:||.|....:     .|:|...|..::.||:|:..:..||:
 Worm    13 FAFGGTAGMGATLVVQPLDLVKNRMQLSGTTGKK-----EYRSSMHALTSIMKNEGVFAVYNGLS 72

  Fly    71 PALCFQFVINSFRLSIYTHAVEKGWVHNNKGEISFAKGMFWGALGGVVGSYCASPFFLIKTQLQA 135
            ..|..|....:.||..|...:|: :...:| .:||......|...|.:||:..:|..:...::..
 Worm    73 AGLLRQATYTTTRLGTYAFLLER-FTEKDK-PLSFGMKAVLGMTAGGIGSFVGTPAEIALIRMTG 135

  Fly   136 QAAKQIAVGYQHQHASMSDAIRKIYRKNGVFGLWRGSLANVSRATVASAVQIAVFGQAKSLLKEN 200
            ..  ::.|..:..:..:.:|:.:|.::.||..||||....|.||.|.:|.|:|.:.|||..|..:
 Worm   136 DG--RLPVEQRRNYTGVVNALTRITKEEGVLTLWRGCTPTVLRAMVVNAAQLATYSQAKQALLAS 198

  Fly   201 GVVTHPTILSFCSGLAAGSFVSLAITPLDVVTTRLYNQGV-DAQGRGIYYRGWLDCVLTILRSEG 264
            |.|.......|.:.:.:|...::|..|:|:..||:.:..| |.:..   |:...|....::::||
 Worm   199 GKVQDGIFCHFLASMISGLATTIASMPVDIAKTRIQSMKVIDGKPE---YKNAFDVWGKVIKNEG 260

  Fly   265 VYGLYKGFWPIYLRSAPYSTLVLLFFDELIALREKYDL 302
            ::.|:|||.|.|:|..|::.|..:..:::.|...:|.|
 Worm   261 IFALWKGFTPYYMRLGPHTVLTFIILEQMNAAYFQYVL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18327NP_001260966.1 Mito_carr 4..87 CDD:278578 25/80 (31%)
PTZ00169 5..293 CDD:240302 79/287 (28%)
Mito_carr 101..201 CDD:278578 27/99 (27%)
Mito_carr 204..296 CDD:278578 22/92 (24%)
misc-1NP_493694.2 Mito_carr 7..99 CDD:278578 27/91 (30%)
Mito_carr 101..196 CDD:278578 27/97 (28%)
Mito_carr 202..296 CDD:278578 23/96 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R857
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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