DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3m and zgc:114126

DIOPT Version :9

Sequence 1:NP_001286407.1 Gene:eIF3m / 36565 FlyBaseID:FBgn0033902 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001028904.1 Gene:zgc:114126 / 619250 ZFINID:ZDB-GENE-050913-52 Length:370 Species:Danio rerio


Alignment Length:357 Identity:164/357 - (45%)
Similarity:250/357 - (70%) Gaps:5/357 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPSQIDGILNSIVSIMITIPLDRGENIVLAY 88
            :.|||:|..  |:..::|||..||..|..||::.:..:::..||||.|:::.:.::|||::|..:
Zfish     2 QSLGADIPD--SSGVLDDDLTHIIESCHFCFQENKELEMEAALNSITSLLVCMDMNRGESLVKKF 64

  Fly    89 CEKMTKAPNLPLGKVCLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCEQVLEVFSGVDQLKSQF 153
            |:|:|:..:..|...||:.|:.|:..|.|.|..||.||..|:.:|.:..|::.||:....||..|
Zfish    65 CKKLTREQSKKLEISCLKVLYLLYQGLQTQSTPRYEVYCELIPLAGRTGQIMSVFTDTPTLKKSF 129

  Fly   154 ANCPPSSEQMQKLYRLLHD-VTKDTNLELSSKVMIELLGTYTADNACVAREDAMKCIVTALADPN 217
            ...  :.:::|.||||:|: :.|....|.::||::|||||||.:||..|:|||.:|||:||||||
Zfish   130 PRL--TIDKLQHLYRLIHEALLKCKESEKAAKVIMELLGTYTPENASQAKEDAQRCIVSALADPN 192

  Fly   218 TFLLDPLLSLKPVRFLEGDLIHDLLSIFVSEKLPAYVQFYEDHREFVNSQGLNHEQNMKKMRLLT 282
            ||||||||:|.||:.|||..||:||:|||::.||.|:.||.:::|||:|.||:||:|::||||||
Zfish   193 TFLLDPLLALPPVKVLEGAPIHELLTIFVTDPLPTYLTFYNENKEFVDSLGLSHEENVRKMRLLT 257

  Fly   283 FMQLAESSPEMTFETLTKELQINEDEVEPFVIEVLKTKLVRARLDQANQKVHISSTMHRTFGAPQ 347
            |||:||:..|:||:.:..:|||:|.:|..|:|:|||||||:||::...:|:.:|:|||||||..|
Zfish   258 FMQMAEAKEELTFDEVQDQLQISEKDVHQFIIDVLKTKLVKARVNDKQKKILVSATMHRTFGKMQ 322

  Fly   348 WEQLRDLLQAWKENLSTVREGLTSVSSAQLDL 379
            |..||..|.:|:.:|..:..|||:|...|.|:
Zfish   323 WAHLRGTLGSWETHLKNLSNGLTAVVKLQADI 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3mNP_001286407.1 PCI 236..336 CDD:396121 52/99 (53%)
eIF3m_C_helix 341..369 CDD:407846 11/27 (41%)
zgc:114126NP_001028904.1 PCI 212..311 CDD:279707 52/98 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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