DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3m and EIF3M

DIOPT Version :9

Sequence 1:NP_001286407.1 Gene:eIF3m / 36565 FlyBaseID:FBgn0033902 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_006351.2 Gene:EIF3M / 10480 HGNCID:24460 Length:374 Species:Homo sapiens


Alignment Length:372 Identity:175/372 - (47%)
Similarity:256/372 - (68%) Gaps:2/372 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SHPVFIDLSLDEQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPSQIDGILN 67
            |.|.|||:|.::|..|||.|.|..|||||.|.|..|:..||.:||..||||.|: :...::.::|
Human     2 SVPAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVESVMN 65

  Fly    68 SIVSIMITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSLWRLFNNLDTASPLRYHVYYHLVQV 132
            |:||:::.:..|:.|.::.:.|||:.|........:.||.|..||:.:|..:|:||.||..|::|
Human    66 SVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKV 130

  Fly   133 AKQCEQVLEVFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKD-TNLELSSKVMIELLGTYTAD 196
            |..|..:..:.:.:||::...::...::|:...|.|||::...| ...:.:||||:||||:||.|
Human   131 AASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTED 195

  Fly   197 NACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGDLIHDLLSIFVSEKLPAYVQFYEDHR 261
            ||..||.||.:|||.||.|||.||.|.||:||||:||||:||||||:||||.||.:||:||::::
Human   196 NASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNK 260

  Fly   262 EFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETLTKELQINEDEVEPFVIEVLKTKLVRARL 326
            :|::|.||.|||||.||||||||.:|..:.|::|:|:.:||||..|:||.|||:.::||:|..::
Human   261 DFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKI 325

  Fly   327 DQANQKVHISSTMHRTFGAPQWEQLRDLLQAWKENLSTVREGLTSVS 373
            ||..:||.:|.:.|||||..||:||.|.|.|||:||:.|:..|.|:|
Human   326 DQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSLS 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3mNP_001286407.1 PCI 236..336 CDD:396121 54/99 (55%)
eIF3m_C_helix 341..369 CDD:407846 16/27 (59%)
EIF3MNP_006351.2 PINT 269..357 CDD:214509 46/87 (53%)
Interaction with HSV-1 and HSV-2 344..374 15/29 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159103
Domainoid 1 1.000 188 1.000 Domainoid score I3333
eggNOG 1 0.900 - - E1_KOG2753
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4639
Inparanoid 1 1.050 343 1.000 Inparanoid score I2344
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54703
OrthoDB 1 1.010 - - D353768at33208
OrthoFinder 1 1.000 - - FOG0005091
OrthoInspector 1 1.000 - - oto91256
orthoMCL 1 0.900 - - OOG6_103094
Panther 1 1.100 - - LDO PTHR15350
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2512
SonicParanoid 1 1.000 - - X6210
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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