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Protein Alignment O-fut1 and Pofut1

DIOPT Version :9

Sequence 1:	NP_001286406.1	Gene:	O-fut1 / 36564	FlyBaseID:	FBgn0033901	Length:	402	Species:	Drosophila melanogaster
Sequence 2:	NP_001002278.1	Gene:	Pofut1 / 311551	RGDID:	1303001	Length:	395	Species:	Rattus norvegicus

Alignment Length:	394	Identity:	170/394 - (43%)
Similarity:	238/394 - (60%)	Gaps:	25/394 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 LKMKLRFVNLILLLISSTCAQLGG--DPNGYLTYCPCMGRFGNQADHFLGSLAFAKALNRTLILP 66
            |.::..|:.|:|||......:.||  |..|||.|||||||||||||||||||||||.|||||.:|
  Rat    11 LLLRASFLLLLLLLPLPLRGRAGGSWDLAGYLLYCPCMGRFGNQADHFLGSLAFAKLLNRTLAVP 75

  Fly    67 PWVEYR--RGELRSRQVPFNTYFEVEPLKEYHRVITMADFMWHLADDIWPESERVSFCYKERYSL 129
            ||:||:  :....:..|.:..||::|||:.|||||::.|||..||...||..:||::|::
  Rat    76 PWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRVISLEDFMEKLAPFHWPPEKRVAYCFE----- 135

  Fly   130 QQEKNDPDKPNCHAKDGNPFGPFWDTFHIDFVRSEFYAPLHFDVHHSNEAAKWQTKYPAESYPVL 194
            ...:..|||..|..|:|||||||||.||:.|.:||.:..:.|...:..:   |..::|.:.:|||
  Rat   136 VAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTGISFSASYKEQ---WIQRFPPKEHPVL 197

  Fly   195 AFTGAPASFPVQLENCKLQRYLQWSQRYREASKDFIREQLPRGAFLGIHLRNGIDWVRACEHVKD 259
            |..||||.|||..|:.:||:|:.||.......:..|...|.| .::|||||.|.||..||..:||
  Rat   198 ALPGAPAQFPVLEEHRELQKYMVWSDEMVRTGEAQISTHLVR-PYVGIHLRIGSDWKNACAMLKD 261

  Fly   260 ---SQHLFASPQCLGYKNERGA-LYPELCMPSKEAIIRQLKRTIKNVRQTQPDNEIKSVFVASDS 320
               ..|..|||||:||...... |...:|:|..:.|.|.:|..::.:       :.:||::|:||
  Rat   262 GTAGSHFMASPQCVGYSRSTATPLTTTMCLPDLKEIQRAVKLWVRAL-------DARSVYIATDS 319

  Fly   321 NHMIGELNTALSRMGISVHKLPEDDPYLDLAILGQSNHFIGNCISSYSAFEKRERDVHGFPSYFW 385
            ...:.|:. .|.:..:.|..|..:...:||.||||::||||||:||::||.|||||:||.||.|:
  Rat   320 ESYVSEIQ-QLFKEKVKVVSLKPEVAQIDLYILGQADHFIGNCVSSFTAFVKRERDLHGRPSSFF 383

  Fly   386 GFPK 389
            |..:
  Rat   384 GMDR 387

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.