DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CysRS-m and cars1

DIOPT Version :10

Sequence 1:NP_610930.1 Gene:CysRS-m / 36563 FlyBaseID:FBgn0033900 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001112372.1 Gene:cars1 / 368284 ZFINID:ZDB-GENE-030328-29 Length:824 Species:Danio rerio


Alignment Length:711 Identity:209/711 - (29%)
Similarity:313/711 - (44%) Gaps:186/711 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ALICR----RNI----------------SEEAPKQDSPFK-----WRKPIGQH-TGINIYNHGLR 56
            ||:||    |::                ::::|:..:..|     |..|.|.. :.:.:||...|
Zfish    51 ALLCRPPPERHVHALRWYKHIAFLKPQANDQSPECSTKGKRVQPPWSPPEGTDISKLRLYNSLTR 115

  Fly    57 QKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFKINLVTAMNITDVDDKI 121
            .|...:.:....|.||.|||||||::|:|||.:|:..|||:|||::|||.::...|||||:||||
Zfish   116 TKEVFVPQKGNRVLWYCCGPTVYDASHMGHARSYISFDILRRILKNYFKYDVFYCMNITDIDDKI 180

  Fly   122 IKRAQ--------------------------------------------LAGLD----------- 131
            ||||:                                            |..||           
Zfish   181 IKRARQNYLLEQYREKKPSAAQILQDVLTARTPFKAKLAETTDPDKKQMLERLDSAVDAALGPLQ 245

  Fly   132 -----------WQKMARA---------------------------------YEAEFRQDMLRLNV 152
                       .||.|:.                                 :|.|:.:||..|||
Zfish   246 VAVQSKAAQDSIQKQAQVLLEEAKDLLSDWLDSQFGSQVTENSIFSLLPKYWEGEYHKDMEALNV 310

  Fly   153 QAPDVRSHVTTTMPVIIQFIQQLIDGKQAYVTPDNSVYFDVSK-----SKNYGKL---------- 202
            ..|||.:.|:..:|.|::|:::::|....|.: :.|||||.:|     :.:|.||          
Zfish   311 LPPDVLTRVSEYVPEIVEFVKKIVDNGYGYES-NGSVYFDTAKFDSCPAHSYAKLVPEAVGDQKA 374

  Fly   203 -----QNLGLSEDKLDPIKRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHIECSAIAGLFFGR 262
                 .:|.:|.|:|.. ||:..|||||||.|.| ||:|.:|| |.|||||||||||:||...|.
Zfish   375 LQEGEGDLSISADRLSE-KRSQNDFALWKASKPG-EPSWDSPW-GMGRPGWHIECSAMAGSILGE 436

  Fly   263 QLDIHAGGLDLRFPHHENEEAQCCARYKTDQWVNYWVHTGQLHMVGDREKMSKSLGNTISVSELL 327
            .:|||.||.|||||||:||.||..|.::.|.||.|::|||.|.:.|.  ||||||.|.|::.:.|
Zfish   437 SMDIHGGGFDLRFPHHDNELAQSEAYFENDYWVRYFLHTGHLTIAGC--KMSKSLKNFITIKDAL 499

  Fly   328 KKYTADEFRMACLLSNYRNAMPYSDQLMVTARQTLQRFRNFQADLSAYTQFLKPVHL-------- 384
            .|:||.:.|:|.|:.::::.:.||:..|.:|.| .:||.| :..|:.......|..:        
Zfish   500 AKHTARQLRLAFLMHSWKDTLDYSNNTMESAIQ-YERFIN-EFFLNVKDILRSPTDITGQYEKWE 562

  Fly   385 LDEGALKAQLTHTVTEFDNCLRDDFDTARAIS---VLIDQMSSISRCINEQQVDAQEEPAYCIDL 446
            .:|..|........|.....|.|:.||..|:.   .|:.|.::........::.....      |
Zfish   563 AEEIELNKCFYDKKTSVHGALCDNIDTRSALEEMRALVGQSNTYMAARRSAKLPPNRM------L 621

  Fly   447 LLAAGNFINRAIVTFGLSELQDKESLQEKVSFTDHSIDPNLLVNDVINVRGRMRE--RATSGNVK 509
            |.:...::...:.|||  .::..:.:...|.....|.|....|...::|....||  |..:...|
Zfish   622 LQSIALYLTDMLKTFG--AIEGTDPIGFPVGGNGQSADLESTVMPYLSVLSDFREDVRKIAREKK 684

  Fly   510 NPQLLAACDELR-SLLQQHGIQVRDHKQGSSWVFAVSCEK-----------QDDKSKSSAE 558
            ..:||..||:|| ..|.:.|:::.|.....:.|..|..|.           :|||.|...|
Zfish   685 VTELLQLCDQLRDDTLPELGVRLEDRDGLPTSVKLVDKETLLKEKEEKKKLKDDKRKKKEE 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CysRS-mNP_610930.1 CysS 48..543 CDD:439985 192/627 (31%)
cars1NP_001112372.1 GST_C_CysRS_N 2..74 CDD:198343 5/22 (23%)
PTZ00399 85..822 CDD:240402 203/677 (30%)

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