DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13016 and Tmem39b

DIOPT Version :10

Sequence 1:NP_610929.2 Gene:CG13016 / 36562 FlyBaseID:FBgn0033899 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_955009.1 Gene:Tmem39b / 230770 MGIID:2682939 Length:492 Species:Mus musculus


Alignment Length:499 Identity:140/499 - (28%)
Similarity:234/499 - (46%) Gaps:93/499 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ERSSDGSSSSETHDSFAHLLATKQ--------GQSQTP---ATAMP-KHIPFPEHATTSEWLSEL 57
            |..|.|:|.. .|.|.|.:.:.:.        |.|..|   .|.:| :|...||....:..|.||
Mouse    19 EPGSSGASGG-GHSSSASVSSVRSRSRTTSGTGLSSPPLAAQTVVPLQHCKIPELPVQASILFEL 82

  Fly    58 IMCAFTMGSAIVQFINIYRTNWWLPQAH--TRHMVNIELIDPYLRYLLLILNTRRLIYCLLLVKI 120
            .:....:.:..|.:||||:|.||.|.:|  :...:|..|||..|..:..|:..||.|..:    :
Mouse    83 QLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFHLIDFNLLMVTAIVLGRRFIGSI----V 143

  Fly   121 RKRNEKSR---------HLIRLGIKYGFGGLVQLSLGFCAMKLYQKHTYILLLFLFYPVVIYLLI 176
            ::.:::.:         .|.|..:....|..:..||    :.|::.::::.||||.||..:|:  
Mouse   144 KEASQRGKVSLFRSILLFLTRFTVLTATGWSLCRSL----IHLFRTYSFLNLLFLCYPFGMYI-- 202

  Fly   177 FGFQLEPFLRTRFEL-------------PGVYINDL---------------------------PV 201
                  |||:..::|             |...::.|                           |.
Mouse   203 ------PFLQLNYDLRKTNLFTHMASMGPREAVSGLARSRDYFLTLRETWKQHTRQLYGPEAMPT 261

  Fly   202 HSCTTNPVNIRDEVETLRHDFNKRFKQLIFTSMLNAYYTGLVPCCLAVSVQYNVLR-AAQHCIIV 265
            |:|..:|..||:|||.|:.|||.|.|:::.:|||:|||...||.....:..|...| :.:..::|
Mouse   262 HACCLSPSLIRNEVEFLKMDFNWRMKEVLVSSMLSAYYVAFVPVWFVKNTHYYDKRWSCELFLLV 326

  Fly   266 CLGAFSLCAVFLYPAKYSDTLHRATLHLGCWQRIDREPAPSQLIVAASAL--TWSKYSSYNHGTV 328
            .:....:....|.||.|.|.||:|..||||||::|  ||     :.::.|  .|::...:..|.:
Mouse   327 SISTSVILMQHLLPASYCDLLHKAAAHLGCWQKVD--PA-----LCSNVLQHPWTEECMWPQGVL 384

  Fly   329 VKHNGGLYRSHGMVTVATPGNASHARFYKLFHNPTIIYSTLAILQAAVLLVEIGSLSAESVEWHF 393
            |||:..:|::.|...||.|.:.||.||:..|.||..|.:.|.:|:.||::.::.||.: |.:||.
Mouse   385 VKHSKNVYKAVGHYNVAIPSDVSHFRFHFFFSNPLRILNILLLLEGAVIVYQLYSLMS-SEKWHQ 448

  Fly   394 VLSISFVAFTSMGAFFKLVRDYLITKDLYKAEHAVAPDQPFRQR 437
            .:|::.:.|::..|||||:||.|:....|  .::.:|.:....|
Mouse   449 TISLALILFSNYYAFFKLLRDRLVLGKAY--SYSASPQRDLDHR 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13016NP_610929.2 Tmp39 29..423 CDD:463038 130/451 (29%)
Tmem39bNP_955009.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 8/34 (24%)
Tmp39 48..478 CDD:463038 131/455 (29%)

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