Protein Alignment pea and hrpA

DIOPT Version :10

• Sequence 1: NP_610928.1
• Gene: pea / 36561
• FlyBaseID: FBgn0086895
• Length: 1242
• Species: Drosophila melanogaster
• Sequence 2: NP_415931.4
• Gene: hrpA / 948444
• ECOCYCID: G6732
• Length: 1300
• Species: Escherichia coli
• Alignment Length: 759
• Identity: 263/759 - (34%)
• Similarity: 404/759 - (53%)
• Gaps: 106/759 - (13%)

  Fly   475 RALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEIEAMPTSLNKNWIDPLPEDES 539
            |.||.   |:.|||||..  ||...:.|...::...|:|.||
E. coli    29 RRLHG---VKKVKNPDAQ--QAIFQEMAKEIDQAAGKVLLRE----------------------- 65

  Fly   540 RSLAANMRGMAAAPPEV--PEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDN 602
                       ||.||:  |:                          :||:.:.:.|:::|:.|:
E. coli    66 -----------AARPEITYPD--------------------------NLPVSQKKQDILEAIRDH 93

  Fly   603 QILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTI 667
            |::||.||||||||||:.:...|.|...:|.||.|||||:||.:||.|:|||.....|..:||.:
E. coli    94 QVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKV 158

  Fly   668 RFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPEL 732
            ||.|..|..|::|.||||:||.|...:..|..|..|::||||||:::.|.|.|.||..:.:||:|
E. coli   159 RFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDL 223

  Fly   733 KLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLY------TKEPETDYLDASLITVMQIHLR 791
            |:|:||||:|..:||::|..|||..:.|||:||||.|      ..:.|.|.|.|....|.::. :
E. coli   224 KIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELS-Q 287

  Fly   792 EPPGDILLFLTGQEEI-DTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRK 855
            |..||||:|::|:.|| |||     :.:..|  ::....|||:|:.|.:..|.|:|.  ....|:
E. coli   288 ESHGDILIFMSGEREIRDTA-----DALNKL--NLRHTEILPLYARLSNSEQNRVFQ--SHSGRR 343

  Fly   856 VVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKT 920
            :|:|||:||||||:.||.||:|||..:...|:.:|.:..|.:.|||||:|.||.||.||...|..
E. coli   344 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408

  Fly   921 YRLYTERAYRDEMLPTPV---PEIQRTNLATTVLQLKTMGINDLLHFDFMDAPP---VESLVMAL 979
            .|||:|    |:.|..|.   |||.|||||:.:||:..:|:.|:..|.|::||.   ::..|..|
E. coli   409 IRLYSE----DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL 469

  Fly   980 EQLHSLSALDDEG---LLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYR 1041
            |:|.:::. |::.   .||.|||::::.|::|.|::|::.:....|..|.:.|.|.||:|:...|
E. coli   470 EELGAITT-DEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRER 533

  Fly  1042 PKDKQALADQKKAKFNQAEGDHLTLLAVYN---SWKNNKFSNAW---CYENFVQIRTLKRSQDVR 1100
            |.|||..:|:|..:|:..|.|.|..:.::|   ..:....|||:   |..:::....::..||:.
E. coli   534 PMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIY 598

  Fly  1101 KQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR 1165
            .||..::....:.|.|.......|..|:.:|...:...||..:...|...:....|.|.|.||.:
E. coli   599 TQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKK 663

  Fly  1166 QPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFR--FSDP 1207
            .|:||:..|||:|::.:.|....|||:|:...|....:  :|:|
E. coli   664 PPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEP 707

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pea	NP_610928.1	GH2-like_DHX8	7..74	CDD:409668
		S1_DHX8_helicase	285..363	CDD:240189
		HrpA	578..>1203	CDD:441249	240/646 (37%)
hrpA	NP_415931.4	PRK11131	5..1298	CDD:182986	263/759 (35%)