Protein Alignment pea and hrpB

DIOPT Version :10

• Sequence 1: NP_610928.1
• Gene: pea / 36561
• FlyBaseID: FBgn0086895
• Length: 1242
• Species: Drosophila melanogaster
• Sequence 2: NP_414690.4
• Gene: hrpB / 944845
• ECOCYCID: EG12329
• Length: 809
• Species: Escherichia coli
• Alignment Length: 666
• Identity: 204/666 - (30%)
• Similarity: 318/666 - (47%)
• Gaps: 84/666 - (12%)

  Fly   585 SLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQI-TQYLGECGFTARGKIGCTQPRRVAAMSVA 648
            |||:..:..:|:.|:.....:::...||:||:|.: .|.|...|.  .|||...:|||:||.:||
E. coli     3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGI--NGKIILLEPRRLAARNVA 65

  Fly   649 KRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTI 713
            :|:||....:.|..|||.:|.::|..|.|.::.:|:|:|.|....:.||....:::|||.|||::
E. coli    66 QRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERSL 130

  Fly   714 HTDVLFGLLKTAVQ-KRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDY 777
            ..|:...||....| .|.:|||::.|||||..:..|...:||:....||:||||..|...|....
E. coli   131 QADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQR 195

  Fly   778 LDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 842
            .|.::.......||:..|.:||||.|..||....|.|..|   :|.||   ::.|:|.||....|
E. coli   196 FDDAVAVATAEMLRQESGSLLLFLPGVGEIQRVQEQLASR---IGSDV---LLCPLYGALSLNDQ 254

  Fly   843 TRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQ 907
            .:...|||.|.||||:|||||||||||:||..|||....:...::.:||:..|:...:|||:..|
E. coli   255 RKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQ 319

  Fly   908 RAGRAGRTGPGKTYRLYT-ERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPP 971
            |||||||..||.:..|.. |:|.|  ......|||.:::|:..:::|...|.:|.....::|.||
E. coli   320 RAGRAGRLEPGISLHLIAKEQAER--AAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPP 382

  Fly   972 VESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQ 1036
            |.:|:.|...|..|.||:.|.|..: |::||....:|.|:.||   |:.:..||..|...:.::
E. coli   383 VVNLLAAKRLLQMLGALEGERLSAQ-GQKMAALGNDPRLAAML---VSAKNDDEAATAAKIAAI- 442

  Fly  1037 NVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSN---AWCYENFVQIRTLKRSQD 1098
                       |.:..:               :.||.....||.   ||          .:|||.
E. coli   443 -----------LEEPPR---------------MGNSDLGVAFSRNQPAW----------QQRSQQ 471

  Fly  1099 VRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF 1163
            :.|         :|:|.....:|..|...:...|....|::..|:|...|.:.....:..:.||
E. coli   472 LLK---------RLNVRGGEADSSLIAPLLAGAFADRIARRRGQDGRYQLANGMGAMLDANDAL- 526

  Fly  1164 NRQPEWVIYHELVQTTKEYMREV---TTIDPKWLVEFAPSFFRFSDPTK-------LSKFKKNQ- 1217
             .:.||:|...|:|.:......:   ..:|...||:..|...:.||..:       |..:::.|
E. coli   527 -SRHEWLIAPLLLQGSASPDARILLALLVDIDELVQRCPQLVQQSDTVEWDDAQGTLKAWRRLQI 590

  Fly  1218 -----RLEPLYNKYEE 1228
                 :::||....|:
E. coli   591 GQLTVKVQPLAKPSED 606

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pea	NP_610928.1	GH2-like_DHX8	7..74	CDD:409668
		S1_DHX8_helicase	285..363	CDD:240189
		HrpA	578..>1203	CDD:441249	197/626 (31%)
hrpB	NP_414690.4	PRK11664	1..809	CDD:236950	204/666 (31%)