DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and AT1G48650

DIOPT Version :10

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_001154411.1 Gene:AT1G48650 / 841287 AraportID:AT1G48650 Length:1206 Species:Arabidopsis thaliana


Alignment Length:1074 Identity:306/1074 - (28%)
Similarity:489/1074 - (45%) Gaps:257/1074 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 VVTRNQTVKVKVMSITGQKVSLSMKEVD-----------QDSGKDLNPLSHAPEDDESLRDRNPD 385
            :||.:|..:|..:.......|.|...::           |:||......:.....|||.||    
plant    57 LVTHSQRSRVLCVKAARGDASSSTLGIEWRAANLPYFQRQNSGYGRIAYNDYESSDESDRD---- 117

  Fly   386 GPFSSSTSMLNLQGNGMEGDEHESRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEETGL--- 447
              ..||.|. .:.|:.::..:....|....:.:.|..|:...      :|.:..|||..:.|   
plant   118 --VGSSQSQ-QMAGSTLDNIDQWRFKLTMLLRNKEDQEVVSR------ERKDRRDFDHISALATR 173

  Fly   448 ------------------LPK---DEDDEADIEIEIVEEEPPF-----LSGHGRALHD----LSP 482
                              ||.   |.||:.. :.|:|   .||     :..|..:..|    |.|
plant   174 MGLHSRQYSKIVVISKAPLPNYRPDLDDKRP-QREVV---LPFGLQSEVDAHLHSFLDQKKTLIP 234

  Fly   483 VRIVKNPDGSLAQA--------AMMQSALSKER----REQKMLQREQEIEAMPTSLNKNWIDPLP 535
            ....:|...|||..        .:||::|::||    |..::..::|:           |:|.  
plant   235 EMPRQNSSESLANGYGNYETPETVMQNSLARERILRPRSLQLKSKQQQ-----------WVDS-- 286

  Fly   536 EDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVT 600
                                 ||.:|                 :|..|::||.||.:|.|:||:.
plant   287 ---------------------PEGQK-----------------MVGFRKTLPAYKEKDALLKAIA 313

  Fly   601 DNQILIVIGETGSGKTTQITQYLGECGF-TARG---KIGCTQPRRVAAMSVAKRVAEEYGCRLGQ 661
            .||:::|.||||.|||||:.||:.|... .|||   .|.||||||::|:||::|||.|.|.::|:
plant   314 ANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSERVAAERGEQIGE 378

  Fly   662 EVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAV 726
            .|||.:|.|.....:|.:.:.|.|:|||..|::..||..:.:::||.|||.::.|.|..:||..:
plant   379 SVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLL 443

  Fly   727 QKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDAS---LITVMQI 788
            .:||:||||:.||||:|..||.||..||...|||.|:||...:.:    |||:.|   |.|..||
plant   444 PRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLE----DYLETSGYRLTTYNQI 504

  Fly   789 ----------------------------------------------------------------- 788
                                                                             
plant   505 DDYGEEKTWKMQKQAQFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVL 569

  Fly   789 -HL--REPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP 850
             |:  .|.||.:|:|:||.::|::....| |....|| |..::::|..:.::.|..|..|||..|
plant   570 CHIVKGERPGAVLVFMTGWDDINSLKNQL-EAHSLLG-DPNKVLLLACHGSMASSEQRLIFDRPP 632

  Fly   851 AGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRT 915
            .|.||:|:|||:||||:||:.:.||:|.|..|:..|::......|:.:.||:|||:||.|||||.
plant   633 EGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRV 697

  Fly   916 GPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVM--A 978
            .||:.|.||....| :.......||:.||.|.:..||:|::|:..:..|......|.|:|.:  |
plant   698 MPGECYHLYPRCVY-EAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNA 761

  Fly   979 LEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPK 1043
            :|.|..:.||||:..||.||:.::..|:||.|.||||:.....|.|.::|:|:.|||::.|..|.
plant   762 VEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPF 826

  Fly  1044 DKQALADQKKAKFNQAE-GDHLTLLAVYNSWKNNKFSNA---WCYENFVQIRTLKRSQDVRKQLL 1104
            ||:.||:..::||:..: .|||||:..||.||:.:.:::   :|::||:..:|||....:|||..
plant   827 DKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFF 891

  Fly  1105 GIMDRHKL--DVVSAGK---NSVRIQKAICSGFFR---NAAKKDPQEGYRTLVDSQVVYIHPSSA 1161
            .::....|  ::....|   :...::..||:|.|.   :...|:.....:|:.|.||:..  ||:
plant   892 NLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQVLLY--SSS 954

  Fly  1162 LFNRQP----EWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFR----------------FSD 1206
            :....|    .|:::::.|:....::|:.|.:....|:.|......                |..
plant   955 VNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGFDGHLKMLGGYLEFFMK 1019

  Fly  1207 PT----------KLSKFKKNQRLEP-----LYNK 1225
            ||          :|.:..:|:.:.|     ||:|
plant  1020 PTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDK 1053

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 GH2-like_DHX8 7..74 CDD:409668
S1_DHX8_helicase 285..363 CDD:240189 7/41 (17%)
HrpA 578..>1203 CDD:441249 242/717 (34%)
AT1G48650NP_001154411.1 HrpA 299..>822 CDD:441249 194/529 (37%)
OB_NTP_bind 916..998 CDD:400182 18/83 (22%)
DSRM_SF 1106..1160 CDD:380679
Blue background indicates that the domain is not in the aligned region.

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