DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pea and ESP3

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_174527.2 Gene:ESP3 / 840143 AraportID:AT1G32490 Length:1044 Species:Arabidopsis thaliana


Alignment Length:1226 Identity:468/1226 - (38%)
Similarity:662/1226 - (53%) Gaps:260/1226 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LGINDKDLAEFIIDLENKNRTYDTFRKALLDNG-------AEFPDSLVQNLQRIINLMRPSRPGG 81
            ||.:...:..::|.:..|.::.......|:|.|       ..|.:.:...:.|            
plant    18 LGYSQAAVVNYLIAMAKKTKSPTELVGELVDYGFSSSGDTRSFAEEIFARVPR------------ 70

  Fly    82 ASQEKTVG----DKKEDKKSQLLKMFPGLALPNDTYSKKEESDDDEKVKAKPEKHSETHKKTDMS 142
                ||.|    .|.|.:.:.|::       ...||:..:..||:::|..:        ||:.:|
plant    71 ----KTAGVNLYQKHEAEAAMLVR-------KQKTYALLDADDDEDEVVVE--------KKSSVS 116

  Fly   143 DVDAAMMELEALAPGEGATLVRPHKEVSSRDRHKRRSRDRDTKRRSRS---------RED-RHSD 197
                                     |....|:.|:|.|    |:..:|         ||| ||..
plant   117 -------------------------ESRKSDKGKKRFR----KKSGQSDESDGEVAVREDSRHVR 152

  Fly   198 RRRSRSRDKERRRRSRSRDNRRRSRSRE---DRDRDRDRR--HKSSSSRDHHERRRRSRSRSTER 257
            |:.|...|.......|.||.:.|....:   |||..|.|:  .::.|.::..|..||:       
plant   153 RKVSEEDDGSESEEERVRDQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEEAVRRA------- 210

  Fly   258 RDRRDRSRDCSEKMPPPSAAMTDDPEAGKIYSGKIANIVPFGCFVQLFGLRKRWEGLVHISQLRA 322
                             :|...||                      |:.|||             
plant   211 -----------------NALEKDD----------------------LYSLRK------------- 223

  Fly   323 EGRVTDVTEVVTRNQTVKVKVMSITGQKVSLSMKEVDQDSGKDLNPLSHAPEDDESLRDRNPDGP 387
                      |:|.:.:|.:           ..|::|:                  |||...|..
plant   224 ----------VSRQEYLKKR-----------EQKKLDE------------------LRDEIEDEQ 249

  Fly   388 FSSSTSMLNLQGNGMEGDEHESRKRVTRISSPERWEIKQMISSGVLDRS-----EMPD-FDEETG 446
            :......|.           |:..|..|...    |:..::.....|..     .:|| :|:|.|
plant   250 YLFGGEKLT-----------ETELREFRYKK----ELYDLVKKRTQDEDNVEEYRIPDAYDQEGG 299

  Fly   447 LLPKDEDDEADI------EIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSK 505
            :   |::....:      :::..|:..||......             .|..:.:|.:...|.:|
plant   300 V---DQEKRFSVAVQRYRDLDSTEKMNPFAEQEAW-------------EDHQIGKATLKFGAKNK 348

  Fly   506 ERREQKMLQREQEIEAMPTSL--NKNWIDPLPEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKK 568
            :..:......|.:|..:..|:  .:|:.|.:...:                            |.
plant   349 QASDDYQFVFEDQINFIKESVMAGENYEDAMDAKQ----------------------------KS 385

  Fly   569 SSFGKKTDL-TLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARG 632
            ....:||.| .|.|.|:|||||..||.|:|||.::|:|:::|:|||||||||.|||.|.|:|.||
plant   386 QDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRG 450

  Fly   633 KIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAEL 697
            |:||||||||||||||.|||:|.|.:||.||||:||||||||.:|::|||||||||||.|.|.:|
plant   451 KVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDL 515

  Fly   698 KSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRT 762
            .||||:::|||||||:.||:||||:|...:.||:|||:::|||:||.|||.||..||||:.|||.
plant   516 ASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRR 580

  Fly   763 FPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPE 827
            :|||:.||..||.||:||:::|::.||:|||.||||:|.||||||:||.|||..|::.||..:.|
plant   581 YPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRE 645

  Fly   828 LIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGM 892
            |||.|:|:.||||:|.:||:|.|.|:||||:||||||||||||||.|||||||.|.|.||.:|||
plant   646 LIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGM 710

  Fly   893 DSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMG 957
            :||::||||:|:|.|||||||||.|||.|||||...|.:::....|||:||||||:.||.||::|
plant   711 ESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLG 775

  Fly   958 INDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQC 1022
            |:||::|||||.||.|:||.:||.|.:|.||:..|.||:.|||||||||:|.||||:::|...:|
plant   776 IHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKC 840

  Fly  1023 SDEILTIVSMLSV-QNVFYRPKDKQALADQKKAKFNQAE-GDHLTLLAVYNSWKNNKFSNAWCYE 1085
            ||||::|.:|||: .::||||||||..||..:..|:... |||:.||.||:|||...||..||||
plant   841 SDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYE 905

  Fly  1086 NFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVD 1150
            |::|:|::||::|:|.||.|:::|.::|:.|.......::|:|.:|||.:.||......|||:..
plant   906 NYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKH 970

  Fly  1151 SQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSD 1206
            .|.|:|||:|.|....|.||:|||||.|:|||||:||.:.|:||:|.||.:::..|
plant   971 PQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKD 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189 9/77 (12%)
HrpA 573..1221 CDD:224557 376/637 (59%)
ESP3NP_174527.2 HrpA 365..1034 CDD:224557 380/690 (55%)
DEXDc 421..559 CDD:238005 94/137 (69%)
HELICc 630..732 CDD:197757 68/101 (67%)
HA2 802..887 CDD:214852 44/84 (52%)
OB_NTP_bind 911..1021 CDD:285018 50/109 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.730

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