Protein Alignment pea and NIH

DIOPT Version :10

• Sequence 1: NP_610928.1
• Gene: pea / 36561
• FlyBaseID: FBgn0086895
• Length: 1242
• Species: Drosophila melanogaster
• Sequence 2: NP_172152.1
• Gene: NIH / 837177
• AraportID: AT1G06670
• Length: 1576
• Species: Arabidopsis thaliana
• Alignment Length: 946
• Identity: 240/946 - (25%)
• Similarity: 390/946 - (41%)
• Gaps: 275/946 - (29%)

  Fly   398 QGNGMEGDE----HESRKR-------VTRISSPERWEIKQMISSGVLDRSEMPDFDEETGLLPKD 451
            :|:|:...:    :|:|.:       :::..|..|:|.:...:.|:          .:|.:.||
plant    76 KGDGISKSDKRRMYEARNQKEKEGDGISKSYSKHRYETRFQKAGGI----------RKTRISPK- 129

  Fly   452 EDDEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNP--DGSLAQAAMMQSALSKERREQKMLQ 514
                   :::.|...|...:    .||||    ..:.|  ||
plant   130 -------KLKCVSFPPEAKA----VLHDL----FTRYPPCDG----------------------- 156

  Fly   515 REQEIEAMPTSL--------NKNWIDPLPEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSF 571
                 :...|||        |.||.|...:.                   |...||.|.....|.
plant   157 -----DTTGTSLGIYTTGNVNSNWKDDFFKK-------------------PHMTKHDIENNVVSL 197

  Fly   572 GKKTD-----LTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTAR 631
            ..:..     ..:.|.|..|||...||.:|.||..||::::.||||.|||||:.|||.:..:.::
plant   198 SSRLKKERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSK 262

  Fly   632 G---KIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECL- 692
            .   ||.||||||::|:||:.|::.|.|..:|:.|||.:|.:.....|:.:.:.|:|:|||..:
plant   263 KEACKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIG 327

  Fly   693 --MEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPI 755
              :.:.:...:.|::||.|||..::|.:..:|:..:...|.|:||:.||||||.:||:||...|:
plant   328 KGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPV 392

  Fly   756 FTIPGRTFPVEVLYT-----------------------KEPETDYLDASL--------------- 782
            ..:||.|:||...:.                       |:.:...||.::
plant   393 VRVPGFTYPVRTFFLDDALSVLNSDKNSHLLSAVKRDFKDEDKVSLDEAIDLAWTNDEFDCLVDL 457

  Fly   783 ---------------------------------------------------ITVMQIH------- 789
                                                               ||.:::.
plant   458 VSSEGSHEAYNYQNSTTGLTPLMVFAGKGRVSDVCKLLSVGADCTLKSKEGITALELAEKENQFE 522

  Fly   790 ----LREPPGD--------------------------------------------ILLFLTGQEE 806
                :||..|:                                            ||:||.|.||
plant   523 TAQIIREHAGNIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEE 587

  Fly   807 ID-TACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTID 870
            |. |..::|.:|..:   ...:.|||.::|.:|:|.|.::|:..|.|.||:|:||||||:::|||
plant   588 ISKTKEKLLDDRFFA---HSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTID 649

  Fly   871 GIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLP 935
            .:.||:|.|.:|:|.|:....:.:|..:.:|:|.||||||||||...|..|.||::  .|...||
plant   650 DVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSK--LRAASLP 712

  Fly   936 T-PVPEIQRTNLATTVLQLKTM----GINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLT 995
            . .|||:.|..:....||:|.:    .:||.|. ..||.|..:|:..||..|..:.||..|..||
plant   713 EYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQ-KLMDPPVAQSIENALIILKDIGALTPEEELT 776

  Fly   996 RLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRP-----KDKQALADQKKAK 1055
            .||::..:.|:.|.:|||:..::.:.|.|..|.:......::.|..|     :.|.|.|..:.|.
plant   777 ELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELAS 841

  Fly  1056 FNQAEGDHLTLLAVYNSWKNNKFS---NAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSA 1117
            ......|||..:|.:..|||.|.|   ..:|.:.|:....:||..|:.::|.|.::||.:...|:
plant   842 LYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSS 906

  Fly  1118 GKNSVR------IQKAICSGFFRNAAKKDPQEGYRT 1147
            ...|:.      ::..|..|.:....:..|....||
plant   907 SNCSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRT 942

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pea	NP_610928.1	GH2-like_DHX8	7..74	CDD:409668
		S1_DHX8_helicase	285..363	CDD:240189
		HrpA	578..>1203	CDD:441249	208/740 (28%)
NIH	NP_172152.1	R3H_DEXH_helicase	18..76	CDD:100077	240/946 (25%)
		HrpA	217..>820	CDD:441249	175/608 (29%)
		ANKYR	<468..575	CDD:440430	5/106 (5%)
		ANK repeat	475..505	CDD:293786	0/29 (0%)
		ANK repeat	507..533	CDD:293786	4/25 (16%)
		OB_NTP_bind	919..1007	CDD:400182	5/24 (21%)