DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pea and EMB3011

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_196805.2 Gene:EMB3011 / 831141 AraportID:AT5G13010 Length:1255 Species:Arabidopsis thaliana


Alignment Length:1265 Identity:478/1265 - (37%)
Similarity:698/1265 - (55%) Gaps:158/1265 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 GGASQEKTVGDKKEDKKSQLLKMFPGLALPNDTYSKKEESDDDEKVKAKPEKH----SETHKKTD 140
            ||...:..:..|..::||:       |.|......||:.:..:.:.|. |:|.    :.:..:.|
plant    20 GGVPVKDKLTFKAPERKSR-------LGLDARAIEKKDNAKTEGEFKV-PKKSAISVTSSLDEED 76

  Fly   141 MSDVDAAMMELEALAPGEGATLVRPHKEVSSRDRHKRRSR-------DRDTKRRSRSREDRHSDR 198
            .|||.......|...|...:   |.::|.|||.:..:.|.       ..|.....|:.....|..
plant    77 KSDVSGLDFGTENTRPVHSS---RRYREKSSRSQSAQESTVTTENAGTSDISITPRTLSCTSSYE 138

  Fly   199 RRSRSRDKERRRRSRSRDNRRRSRSREDRDRDRDRRHKS--SSSRDHH-ERRRRSRS------RS 254
            |...:|.:|..||.||...|.|.|:..| :.|..||.:|  .|.||:| |:|||..|      ||
plant   139 RGGSNRHREEHRRDRSETPRSRQRNTYD-EMDHYRRRESYRQSDRDYHGEKRRRYNSDWRTPGRS 202

  Fly   255 T--------ERRDRRDRSRDCSEK-MPPPS---AAMTDDPEAGKIY----SGKIANIVPF----- 298
            .        ||....||....|.: .|.||   ||.:.|......:    ...:::..|:     
plant   203 DWDDGQDEWERSPHGDRGSSYSRRPQPSPSPMLAAASPDARLASPWLDTPRSTMSSASPWDMGAP 267

  Fly   299 --------GCFVQ----LFGLRKRW-----------EGLVHISQLRAEGRVTDVTEVVTRNQTVK 340
                    |..::    .:|.|...           ||  |..:.|::| ..:....:|....|:
plant   268 SPIPIRASGSSIRSSSSRYGGRSNQLAYSREGDLTNEG--HSDEDRSQG-AEEFKHEITETMRVE 329

  Fly   341 VKVMSITGQKVSLSMKEVDQDSGK---DLNPLSHAPEDDESLRDRNPDGPFSSSTSMLNLQGNGM 402
            ::..|        .....|.|.|.   |.:..|....||.||:.:..:    .:..::...|:.|
plant   330 MEYQS--------DRAWYDTDEGNSLFDADSASFFLGDDASLQKKETE----LAKRLVRRDGSKM 382

  Fly   403 EGDEHESRKRVTRISSPERWEIKQMISSGVLDRSEM-PDFDEETGLLPKDEDDEADIEIEIVEEE 466
              ...:|:|.....:...:||.:|::.||.:..:|: .:||.|         :|....:.:.:.:
plant   383 --SLAQSKKYSQLNADNAQWEDRQLLRSGAVRGTEVQTEFDSE---------EERKAILLVHDTK 436

  Fly   467 PPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEIEAMPTSLNKNWI 531
            ||||.|.........||..||:|...:|..:...|.|.||.||::...:.::         :.| 
plant   437 PPFLDGRVVYTKQAEPVMPVKDPTSDMAIISRKGSGLVKEIREKQSANKSRQ---------RFW- 491

  Fly   532 DPLPEDESRSLAANMRGMAAAPPEV------------------PEWKKHVIGGKK-SSFGKKTDL 577
                 :.:.|...|:.|:..:..::                  .::.:|:..|:. |.|....  
plant   492 -----ELAGSNLGNILGIEKSAEQIDADTAVVGDDGEVDFKGEAKFAQHMKKGEAVSEFAMSK-- 549

  Fly   578 TLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRV 642
            |:.||||.|||:.:||:|::.:.:||:::|:||||||||||:||||.|.|:|..|.:||||||||
plant   550 TMAEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRV 614

  Fly   643 AAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDE 707
            |||||||||:||....||.::||.|||||.|.|.|:|||||||:||||.|.:::|..|.|:::||
plant   615 AAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDE 679

  Fly   708 AHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKE 772
            ||||:::||||||:||..|.:|.:.|||||||||:|.|||.:|...|||.||||||||.:||:|.
plant   680 AHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFPVNILYSKT 744

  Fly   773 PETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSL----GPDVPELIILPV 833
            |..||::|::...|.||:..||||||:|:|||:||:.||..|.|||:.|    ..::..|:|||:
plant   745 PCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERMEQLVSSSSREITNLLILPI 809

  Fly   834 YSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVT 898
            ||.||:::|.:||.....|:||.::||||||||||:|||:||:|.|:.|.||:|.:.|||:|.|.
plant   810 YSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNPRMGMDALQVF 874

  Fly   899 PISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLH 963
            |||:||:.||||||||||||..||||||.||.:||||:||||||||||...||.||::.|::||.
plant   875 PISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLD 939

  Fly   964 FDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILT 1028
            |||||.||.|:::.::.||..|.||::.|.||.||.:|.||||:|.|:|||:|...|.|.||:||
plant   940 FDFMDPPPQENILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLT 1004

  Fly  1029 IVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTL 1093
            |||||||.:||:|||::...:|..:.||...|.||||||.||..||.:.:...||.::::|::.|
plant  1005 IVSMLSVPSVFFRPKERAEESDAAREKFFVPESDHLTLLNVYQQWKEHDYRGDWCNDHYLQVKGL 1069

  Fly  1094 KRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHP 1158
            :::::||.|||.|:.:.|:::.|.|.:...::|||||.:|.|:|:......|.........::||
plant  1070 RKAREVRSQLLDILKQLKIELRSCGPDWDIVRKAICSAYFHNSARLKGVGEYVNCRTGMPCHLHP 1134

  Fly  1159 SSALF--NRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSD-PTKLSKFKKNQR-- 1218
            ||||:  ...|::|:||||:.||||||:..|:::|.||.|..|.||...| .|.:.:.||.|:  
plant  1135 SSALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAELGPMFFSVKDSDTSMLEHKKKQKEE 1199

  Fly  1219 -------LEPLYNKYEEPNAWRISRVRRRR 1241
                   :|.|.....|.......|.|::|
plant  1200 KSGMEEEMEKLRRDQVESELRSKERERKKR 1229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189 14/109 (13%)
HrpA 573..1221 CDD:224557 348/663 (52%)
EMB3011NP_196805.2 DUF1777 158..>247 CDD:285811 30/89 (34%)
DEXDc 553..739 CDD:214692 118/185 (64%)
DEXDc 575..713 CDD:238005 89/137 (65%)
HELICc 806..892 CDD:197757 52/85 (61%)
HA2 961..1043 CDD:214852 45/81 (56%)
OB_NTP_bind 1077..1177 CDD:285018 39/99 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

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