DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and AT4G18465

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_567558.2 Gene:AT4G18465 / 827579 AraportID:AT4G18465 Length:695 Species:Arabidopsis thaliana


Alignment Length:682 Identity:311/682 - (45%)
Similarity:448/682 - (65%) Gaps:36/682 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   555 EVPEWKKHVIGG-----------KKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVI 608
            |.|.:::...||           ..||:|.   ..:.:|||.||:||.|.:::..|.::...|::
plant     9 EKPRFEEDGEGGIVFMSNNLASSSSSSYGY---ANIEKQRQRLPVYKYRTEILYLVENHATTIIV 70

  Fly   609 GETGSGKTTQITQYLGECGFTARGK-IGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFED- 671
            |||||||||||.|||.|.|:...|: |.||||||:|..:|:.|||||.|..||:|||||||||| 
plant    71 GETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDH 135

  Fly   672 CTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIV 736
            .||..|.:|::|||:|:||.:.:..|..|||||:||||||:|.||:|.||||...::||||:||:
plant   136 TTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIMIDEAHERSISTDILLGLLKKIQRRRPELRLII 200

  Fly   737 TSATLDAVKFSQYF-----------------FKAPIFTIPGRTFPVEVLYTKEPETDYLDASLIT 784
            :|||::|...|.:|                 .:..|.::.||.|.|::.|.:||.:||:.:.:.|
plant   201 SSATIEAKTMSNFFNSSKKRHAPEGSTPGPKLEPAILSVEGRGFSVKIHYVEEPVSDYIRSVVST 265

  Fly   785 VMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPA 849
            ::.|:.||||||:|:||||||:|:||.::|.|...|...:...|:.||:||.|....|..||.|.
plant   266 ILLINEREPPGDVLVFLTGQEDIETAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPT 330

  Fly   850 PAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGR 914
            |.|.|||:::|||||||||::|:.||:|.||.|||.||..:.::||||.|||:|:|:||:|||||
plant   331 PRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGR 395

  Fly   915 TGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMAL 979
            ..|||.||||||..:.::|....:||:||:||.:||:|||.:||:::|.||:...|..|:::.||
plant   396 VRPGKCYRLYTEDYFLNQMPGEGIPEMQRSNLVSTVIQLKALGIDNILGFDWPAPPSSEAMIRAL 460

  Fly   980 EQLHSLSALDDEGLLTR-LGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPK 1043
            |.|:||..|||:..||. .|.::||.||:|.:|||::.|..|.||.||:||.::||||:|:...:
plant   461 EVLYSLQILDDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLSVQSVWIIAR 525

  Fly  1044 DKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMD 1108
            ..|...|:.|.:|..|||||:|.|.||..:..:|....|||:||:..:::|:..::|.||..|..
plant   526 GVQKEQDEAKLRFAAAEGDHVTFLNVYKGFLESKKPTQWCYKNFLNYQSMKKVVEIRDQLKRIAR 590

  Fly  1109 RHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEG--YRTLVDSQVVYIHPSSALFNRQPEWVI 1171
            |..:.:.|...:...::||:.:|||.||.:.:|...  |:|:..|:.|||||||.||...|:||:
plant   591 RLGITLKSCDGDMEAVRKAVTAGFFANACRLEPHSNGVYKTIRGSEEVYIHPSSVLFRVNPKWVV 655

  Fly  1172 YHELVQTTKEYMREVTTIDPKWLVEFAPSFFR 1203
            |..:|.|.::|||.|.||:|.||.|.||.|::
plant   656 YQSIVSTERQYMRNVVTINPSWLTEVAPHFYQ 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 304/653 (47%)
AT4G18465NP_567558.2 HrpA 41..683 CDD:224557 301/641 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

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