DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and AT3G26560

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_189288.1 Gene:AT3G26560 / 822264 AraportID:AT3G26560 Length:1168 Species:Arabidopsis thaliana


Alignment Length:1244 Identity:713/1244 - (57%)
Similarity:888/1244 - (71%) Gaps:87/1244 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DELQKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPDSLVQN 66
            :||.||.:|||||.:|.||:.|||..:|.||||||||...:.|.|.|.|.|.:.|||.||..|::
plant     4 EELNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYFVRS 68

  Fly    67 LQRIINLMRPSRPGGASQEKTVGDKKEDKKSQLLKMFPGLALPNDTYSKKEESDDDEKVKAKPEK 131
            |...|:.:.|.:|                ||:                ||:|..||:|.|....|
plant    69 LLTTIHGIYPPKP----------------KSE----------------KKKEEGDDQKFKGLAIK 101

  Fly   132 HSETHKKTDMSDVDAAMMELEALAPGEGATLVRPHKEVSSRDRHKRRSRDRDTKRRSRSREDRHS 196
                       |....:.|||              ||:......:||..||:   |.|.|.:...
plant   102 -----------DTKDKVKELE--------------KEIEREAEERRREEDRN---RDRDRRESGR 138

  Fly   197 DRRRSRSRDKERRRRSRSRDNRRRSRSREDRDRDRDRRHKSSSSRDHHERRRRSRSRSTERRDRR 261
            ||.|.|:||:: .||.|.||..|.....|..||..||||           |.|.|....|..|||
plant   139 DRDRDRNRDRD-DRRDRHRDRERNRGDEEGEDRRSDRRH-----------RERGRGDGGEGEDRR 191

  Fly   262 DRSRDCSEKMPPPSAAMTDDPEAGKIYSGKIANIVPFGCFVQLFGLRKRWEGLVHISQLRAEGRV 326
             |.|...::.........::||..::|.|::..::..|||||....|.: |||||:||: |..||
plant   192 -RDRRAKDEYVEEDKGGANEPELYQVYKGRVTRVMDAGCFVQFDKFRGK-EGLVHVSQM-ATRRV 253

  Fly   327 TDVTEVVTRNQTVKVKVMSITGQKVSLSMKEVDQDSGKDLNPLSHAPEDDESLRD----RNPDGP 387
            ....|.|.|:..|.|||:||:..|.||||::|||::|:||.||....::|:|.|.    |..||.
plant   254 DKAKEFVKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSRSNPSYRTKDGQ 318

  Fly   388 FSSSTSMLNLQGNGM--EGDEHESRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEE-TGLLP 449
            .:.:    .:.|..:  |.|...||:.:.::|||||||.||:|:||||...|.|.:||: .|:|.
plant   319 VTKT----GISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGDGMLY 379

  Fly   450 KDEDDEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQ 514
            ::|..|.::|||:.|:||.||.|..|...|:|||:|.|||:|||::||.:||||:|||||.:..|
plant   380 QEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTKERREMREQQ 444

  Fly   515 REQEIEAMPTSLNKNWIDPLPEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTL 579
            :...::::|..||:.|.||:||...|.||..:||:..:..::|||||... ||..:||:::.|::
plant   445 QRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAF-GKTPTFGQRSKLSI 508

  Fly   580 VEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAA 644
            .|||:|||||||:.:||:||.|||:|:||||||||||||:||||.|.|:|.:|||||||||||||
plant   509 QEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAA 573

  Fly   645 MSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAH 709
            ||||||||||:|||||:||||.|||||||.|:|:||||||||||||.|::..|..||||||||||
plant   574 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAH 638

  Fly   710 ERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPE 774
            ||||||||||||||..:::|.:|:||||||||||.|||.|||...||||||||||||:||||:||
plant   639 ERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE 703

  Fly   775 TDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPS 839
            ||||||:||||:||||.||.||||:|||||||||:||:.||||||.||.:|||||||||||||||
plant   704 TDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPS 768

  Fly   840 EMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAA 904
            |||:|||||.|.|.||||:||||||.|||||||:|||||||.||.|||.|.|::|||:||||||:
plant   769 EMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQAS 833

  Fly   905 AKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDA 969
            |||||||||||||||.||||||.|||:||.||.:|||||.||..|.|.:|.|||||||.|||||.
plant   834 AKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDP 898

  Fly   970 PPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLS 1034
            |..::|:.|:|||:||.|||:|||||:|||:||||||||.|||||:.||.|.|||||||:::|:.
plant   899 PQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQ 963

  Fly  1035 VQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDV 1099
            ..|:||||::|||.||||:|||.|.|||||||||||.:||...||..||:|||:|.|:|:|:|||
plant   964 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDV 1028

  Fly  1100 RKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN 1164
            |||||.|||::|||||:||||..:|:|||.:|||.:.|:|||||||||||::|.||||||||||.
plant  1029 RKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQ 1093

  Fly  1165 RQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKYEEP 1229
            |||:|||||:||.||||||||||.||||||||.||.||:.|||||:||.|:.:|:||||::|.||
plant  1094 RQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEP 1158

  Fly  1230 NAWRISRVR 1238
            |:||:|:.|
plant  1159 NSWRLSKRR 1167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189 35/77 (45%)
HrpA 573..1221 CDD:224557 481/647 (74%)
AT3G26560NP_189288.1 GH2-like_DHX8 9..76 CDD:409668 34/66 (52%)
S1_DHX8_helicase 214..290 CDD:240189 35/77 (45%)
HrpA 504..1129 CDD:224557 469/624 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 215 1.000 Domainoid score I757
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1344 1.000 Inparanoid score I14
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - LDO PTHR18934
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X141
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.840

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