DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pea and AT2G01130

DIOPT Version :10

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_178223.2 Gene:AT2G01130 / 814642 AraportID:AT2G01130 Length:1113 Species:Arabidopsis thaliana


Alignment Length:1000 Identity:292/1000 - (29%)
Similarity:466/1000 - (46%) Gaps:180/1000 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 QDSGKD--LNPLSHAP------EDDESLRDRNP-DGPFSSSTSMLNLQGNGMEGDEHESRKRVTR 415
            |..|.|  .||:..:|      .||....||.| :|.|..:             |..:..||.:.
plant    15 QRLGSDYGFNPVPLSPVRYVSAYDDRVSEDRQPQEGTFHCA-------------DLDDWNKRFSM 66

  Fly   416 ISSPERWEIKQMISSGVLDR--SEMPDFDE------ETGLLPKDEDDEADIEIEIVEEEPPFLSG 472
            :       :|..:...|:.|  .:..|||:      ..||.     ..|..::.:..:.|  |..
plant    67 L-------LKDSLKQEVISREKKDRRDFDKLAALATTLGLY-----SHAYAKVVVFSKIP--LPN 117

  Fly   473 HGRALHDLSPVRIVKNPDGSLAQ--AAMMQSALSKERREQKMLQREQEIEAMPTSLNKNWI--DP 533
            :...|.|..|.|.| |....|.|  .|.:...|||.......:...........|....|.  .|
plant   118 YRFDLDDKKPQREV-NLHTDLLQRVEAYLTEYLSKSSNRIDRVPANSVSRTSSISSTDEWFSEQP 181

  Fly   534 LPEDES-----RSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRD 593
            ||...:     |||....|..        .|:..|.|.:           :::.|.|||.:|.|.
plant   182 LPISATKILWQRSLQLRDRQQ--------YWQASVEGQR-----------MLDSRTSLPAFKQRH 227

  Fly   594 DLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTA-RG---KIGCTQPRRVAAMSVAKRVAEE 654
            .::.|::.||::::.||||.||||||.|::.|....| ||   .|.||||||::||||::|||.|
plant   228 SVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRRISAMSVSERVAYE 292

  Fly   655 YGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLF 719
            .|.:||:.|||.:|.|.....:|.:.:.|.|:|||..|::..|:..:.:::||.|||.::.|.|.
plant   293 RGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLL 357

  Fly   720 GLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPV------EVL---------- 768
            .:||..:.:|.|||||:.||||||..||.||..|.:..|||.|:||      ::|          
plant   358 IILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPVRSHFLEDILEMTRYRLTPY 422

  Fly   769 -----YTKE----------------------------------PET---------DYLDASLITV 785
                 |.:|                                  |||         |.:..:||..
plant   423 NQIDDYGQERTWKMNKQIPKKRKSQITFVVEDALRAADFKEFSPETRESLSCWYPDCIGFNLIEF 487

  Fly   786 MQIHL--REPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDP 848
            :..::  .|.||.||:||||.::|.:..|.|........||:  :::|..:.::.:..|..||:.
plant   488 LLCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDL--VMLLACHGSMETFEQRLIFEE 550

  Fly   849 APAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAG 913
            ..:|.||:|:||||||||:||:.:.:|:|.|..|:..|::......|:.:.||:.:|:||.||||
plant   551 PASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAG 615

  Fly   914 RTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHF--DFMDAPPVESLV 976
            |..||:.|.||.:..| |......:|||.||.|.:..||:|::.:..:..|  ..:.:|.:.::.
plant   616 RVRPGQCYHLYPKCVY-DAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPELLAVQ 679

  Fly   977 MALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYR 1041
            .|:..|..:.|||:...||.|||.:::.|:||.|.||||:...|.|.|.|||:.:.|||::.|..
plant   680 KAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLT 744

  Fly  1042 PKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNA---WCYENFVQIRTLKRSQDVRKQL 1103
            |:||:.||:..|::|::...|||.|:..|..||..:..:|   :|::||:.|::|:....:||:.
plant   745 PQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEF 809

  Fly  1104 L------GIMDRHKLDVVSAGKNSVRIQKAICSGFFR---NAAKKDPQEGYRTLVDSQV-VYIHP 1158
            .      |::|.:.....|.|.::...:..||.|.:.   :....:.....:|:.|.|| :|.:.
plant   810 FSLLKDTGLIDGNPSICNSEGNDANLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNS 874

  Fly  1159 SSALFNRQP-EWVIYHELVQTTKEYMREVTTIDPKWLVEFAPS------------------FFRF 1204
            .:|...:.| .|::::|.::....::|:.|......|:.|..|                  ||..
plant   875 ENARETKIPYPWLVFNEKIKVNSVFLRDSTACSDSTLILFGGSISKGDTDGHLKMLGGYLEFFMK 939

  Fly  1205 SDPTKLSKFKKNQRLEPLYNKYEEP 1229
            .|..::.:..|.:..|.:.||...|
plant   940 PDVAEIYQTLKKELDELIQNKLLNP 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 GH2-like_DHX8 7..74 CDD:409668
S1_DHX8_helicase 285..363 CDD:240189 1/2 (50%)
HrpA 578..>1203 CDD:441249 234/728 (32%)
AT2G01130NP_178223.2 HrpA 218..>817 CDD:441249 211/601 (35%)
OB_NTP_bind 837..918 CDD:400182 16/80 (20%)
dsrm 1025..1087 CDD:425434
Blue background indicates that the domain is not in the aligned region.

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