DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and dqx1

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_001072743.1 Gene:dqx1 / 780200 XenbaseID:XB-GENE-5919961 Length:714 Species:Xenopus tropicalis


Alignment Length:657 Identity:221/657 - (33%)
Similarity:348/657 - (52%) Gaps:36/657 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTAR---GKIGCTQPR 640
            |:.:|..|||:.::...::.:..:.|::|.|..|.||:||:.|:..|...:.|   |.|..:||.
 Frog    31 LLSERHLLPIWDMKAQFLERLQSSNIVLVCGAPGCGKSTQVPQWCAEFALSQRFSCGSIMVSQPH 95

  Fly   641 RVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIML 705
            ..||.|:|.|||:|....||.||.:::..||||.|.||:::..|.:||:|......|:|..:::|
 Frog    96 PTAAFSLALRVADEMDLNLGHEVAFSLPQEDCTGPSTILRFSWDSLLLQEMTSNPLLESAGIVVL 160

  Fly   706 DEAHERTIHTDVLFGLLKTAVQKRPELKL-IVTSATLDAVKFSQYFFKAPIFTIPGRTFPV-EVL 768
            |||..|::.:|:|.||||....:|||.:| :|||..|:|...|....:|.:..:| .|.|| ||:
 Frog   161 DEADARSVASDLLLGLLKDVHVQRPEFRLVVVTSPQLEAPLLSFLGEEASVLRVP-HTAPVCEVV 224

  Fly   769 YTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELI---- 829
            |......|.:.|....|:.||.|..|||:|:||..:||.......|.....||.|.:..|:    
 Frog   225 YRPPVSPDCVLAVSHMVLDIHRRGDPGDVLVFLASEEEAYQCSVSLLTESLSLSPSLGNLVPFTL 289

  Fly   830 -------ILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYN 887
                   :..||.||.....|:         |:|.::.:::|.|.::..|.||:|.|..:|.:||
 Frog   290 LESSGSEVQCVYEALQGHCGTQ---------RRVFLSQSLSELSFSLPNIRYVIDTGAEQQNMYN 345

  Fly   888 SKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQ 952
            .:...|..|..|:|:|.|:.|..||..| ....||||:|..|:.:|.....|.|.:.||:..||.
 Frog   346 PRIRADFQVRRPVSKATAEIRRLRAQAT-DSVCYRLYSETVYQSQMPDFSPPRILQENLSRLVLL 409

  Fly   953 LKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMS 1017
            :|.:.|.|:...||:|.|..|||:.|||.|..|:||||:|.|:.:|..|:|.||:|.:||.::.|
 Frog   410 MKRLDIADMGQCDFLDRPAPESLMQALEDLDYLAALDDDGNLSEVGIIMSEIPLDPQISKSILAS 474

  Fly  1018 VALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAW 1082
            ....|..|:||:.:||||....:.|....|...:.:.:....||||:||:.:|..:|.:  ...|
 Frog   475 CEFHCVSEMLTLAAMLSVVPRCFLPGPHTAEVLESRQELQVPEGDHMTLINIYEKYKES--DEEW 537

  Fly  1083 CYENFVQIRTLKRSQDVRKQLLGIMDRHKLDV----VSAGKNSVRIQKAICSGFFRNAAKK-DPQ 1142
            |....:..|.|::::.:|.:||.::.|.:|.|    ..:.:|::.|::::.||.|...|:. |.|
 Frog   538 CSRCALCPRALQQAERLRAELLELLQRIELPVSPPNFLSQENTLNIRRSLISGGFLKVARDVDGQ 602

  Fly  1143 EGYRTLVDSQVVYIHPSSALFN--RQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFS 1205
            ..|..|....|..:||.|..:.  ..|.||:||:...:....:...|.|.|:.||||||.::..:
 Frog   603 GNYLMLTHKHVANLHPFSVYYGCCPPPAWVLYHDFTISQDNCISIATEILPEMLVEFAPQYYLCN 667

  Fly  1206 DPTKLSK 1212
            .|...|:
 Frog   668 LPPSESR 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 221/657 (34%)
dqx1NP_001072743.1 HrpA 17..>533 CDD:224557 181/512 (35%)
OB_NTP_bind <570..663 CDD:311586 28/92 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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