DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and dhx35

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_001072515.1 Gene:dhx35 / 779970 XenbaseID:XB-GENE-5868299 Length:701 Species:Xenopus tropicalis


Alignment Length:705 Identity:325/705 - (46%)
Similarity:461/705 - (65%) Gaps:35/705 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   549 MAAAPPEVPEWKKHVIG-------GKKSSF-------GKKTDLTLVEQRQSLPIYKLRDDLIKAV 599
            |||....|..||....|       .::|:|       .....|::..|||.||::|||:.::..|
 Frog     1 MAAPVGPVRFWKPGTEGPGATIAEERQSNFEVSSVIYNPHASLSIEHQRQKLPVFKLRNHILYLV 65

  Fly   600 TDNQILIVIGETGSGKTTQITQYLGECGFTARGK-IGCTQPRRVAAMSVAKRVAEEYGCRLGQEV 663
            .:.|.:::|||||.||:|||.|||.|.|:||.|: :|.||||||||:|||.|||||.|..||.||
 Frog    66 ENYQTVVIIGETGCGKSTQIPQYLTEAGWTAEGRVVGVTQPRRVAAVSVAGRVAEERGAVLGHEV 130

  Fly   664 GYTIRFEDCTSPE-TIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQ 727
            ||.|||:|||.|: |.||::|||||:||.:.:..|..|||:|||||||||::||:..||||...:
 Frog   131 GYCIRFDDCTDPQATRIKFLTDGMLVREMMSDPLLTRYSVLMLDEAHERTLYTDIAIGLLKKVQK 195

  Fly   728 KRPELKLIVTSATLDAVKFSQYFFK----------APIFTIPGRTFPVEVLYTKEPETDYLDASL 782
            ||.:|:|:|.||||||.||..:|.:          ..|.|:.||||||::.||:.|..|||.:::
 Frog   196 KRGDLRLVVASATLDAEKFKAFFNQNDTNDPSRDTCAILTVEGRTFPVDIFYTQSPVPDYLKSTV 260

  Fly   783 ITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRI 845
            .|||:||..:..||||.|||||||:::...:|.|:.:.|...  ...|.:||:|:.||:..|.::
 Frog   261 QTVMKIHQSDLEGDILAFLTGQEEVESVVSMLVEQARILSRSGMKKHLRVLPMYAGLPTSEQMKV 325

  Fly   846 FDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAG 910
            |:.....:||||:||||||.|:||:||.:|:|.||||.:.|:.|..::||||.|:|||:|.||||
 Frog   326 FERVSHSARKVVVATNIAEASITINGISFVIDCGFVKLRAYDPKRAVESLVVVPVSQASANQRAG 390

  Fly   911 RAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESL 975
            |:||...|:.||||||..:. ::.|:.|||:||:|||..:||||.:||:::|.|.|:..||.:|:
 Frog   391 RSGRNRSGQCYRLYTEEDFL-KLPPSTVPEMQRSNLAPVILQLKALGIDNVLRFHFLSPPPAQSM 454

  Fly   976 VMALEQLHSLSALDDEGLLTR-LGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVF 1039
            |.|||.|::|..||....||. ||.|||||||.|..:|||:.|....||.|||:|.:|:.:||:|
 Frog   455 VQALELLYALGGLDKHCRLTEPLGVRMAEFPLNPMFAKMLLESGNFGCSAEILSIAAMMQIQNIF 519

  Fly  1040 YRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSW-KNNKFSNAWCYENFVQIRTLKRSQDVRKQL 1103
            ..|.::::.|.::..||...||||||:|.|:.:: |.|| |:.||.:.|:..:.|.|:..||:||
 Frog   520 VVPPNQKSQAIREHRKFAVEEGDHLTMLNVFEAFIKFNK-SSHWCQQRFLNYKGLMRAVTVREQL 583

  Fly  1104 LGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NRQP 1167
            ..::.:.|:...|:..:...|.:.|.||||.||||......|||:.|...:||||:|.|: .:.|
 Frog   584 KKLLSKFKVPKNSSEGDPDPILRCIVSGFFANAAKLHSTGVYRTVRDGHELYIHPTSVLYAEKPP 648

  Fly  1168 EWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPL 1222
            .||::.|:|||.|.|||:||.::..||:|.||.|::  ..|.||:..|..:::.|
 Frog   649 NWVLFSEVVQTNKYYMRDVTAVESAWLLELAPHFYQ--QGTHLSRTSKRAKIDNL 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 315/664 (47%)
dhx35NP_001072515.1 HrpA 7..701 CDD:224557 321/697 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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