Sequence 1: | NP_610928.1 | Gene: | pea / 36561 | FlyBaseID: | FBgn0086895 | Length: | 1242 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004910524.1 | Gene: | ythdc2 / 779469 | XenbaseID: | XB-GENE-5881731 | Length: | 1457 | Species: | Xenopus tropicalis |
Alignment Length: | 1176 | Identity: | 294/1176 - (25%) |
---|---|---|---|
Similarity: | 468/1176 - (39%) | Gaps: | 386/1176 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 355 MKEVDQDSGKDLNPLSHAPEDD--ESLRDRNPDGPFSSSTSMLNLQGNGMEGDEHESRKRVTRIS 417
Fly 418 SPERWEIKQMISSGVLDRSEMPDFDEETGLLPKDEDDEADIEIEIVEEE-----------PPFLS 471
Fly 472 GHGRA-LHDLS-------------PVR--IVKNPDGSLAQAAMMQSALSKERREQ--KMLQREQE 518
Fly 519 IEAMPTSLNKNWIDPLP----------EDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGK 573
Fly 574 KTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQY-LGEC---GFTARGKI 634
Fly 635 GCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLM--EAEL 697
Fly 698 KSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRT 762
Fly 763 FPVEVL------------------YTKE-----------------------PET----------- 775
Fly 776 --DYLD----------------------------------------------------------- 779
Fly 780 -------------------------------------------------------------ASLI 783
Fly 784 TV--------------MQIHLRE------------------------------PPGDILLFLTGQ 804
Fly 805 EEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTI 869
Fly 870 DGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEML 934
Fly 935 PTPVPEIQRTNLATTVLQLKTM-----GINDLLHFDFMDAP-PVESLVM--ALEQLHSLSALDDE 991
Fly 992 GLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKA-- 1054
Fly 1055 ----KFNQAE-GDHLTLLAVYNSW---KNNKFSNAWCYENFVQIRTLKRSQDVRKQLLG------ 1105
Fly 1106 -IMDRHKLDVVSAGKNSVR---IQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ 1166
Fly 1167 ------------------PEWVIYHELVQTTK-EYMREVTTIDPKWLVEFA------------PS 1200
Fly 1201 FFRFSD 1206 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pea | NP_610928.1 | S1_DHX8_helicase | 285..363 | CDD:240189 | 1/7 (14%) |
HrpA | 573..1221 | CDD:224557 | 241/917 (26%) | ||
ythdc2 | XP_004910524.1 | R3H_DEXH_helicase | 76..134 | CDD:100077 | 11/57 (19%) |
HrpA | 219..>1046 | CDD:224557 | 230/838 (27%) | ||
ANK repeat | 535..567 | CDD:293786 | 0/31 (0%) | ||
ANK repeat | 569..600 | CDD:293786 | 4/30 (13%) | ||
OB_NTP_bind | 1001..1096 | CDD:369483 | 21/94 (22%) | ||
YTH | 1316..1447 | CDD:367840 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |