DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and Tdrd9

DIOPT Version :10

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_083332.1 Gene:Tdrd9 / 74691 MGIID:1921941 Length:1383 Species:Mus musculus


Alignment Length:936 Identity:230/936 - (24%)
Similarity:406/936 - (43%) Gaps:228/936 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 PDFDEETGLLPKDEDDEADIEIEIVEEEP------PFLSGHGRALHDLSPVRIVKNPDGSLAQAA 497
            |.|..|.   |::|...::   |:..|:|      |        :...:|.|.......||:|.:
Mouse    30 PAFPAEA---PREEVQRSE---EVPNEDPTAQAQVP--------VKATAPARPASTSGRSLSQRS 80

  Fly   498 MMQSALSKERREQKMLQREQEIEAMPTSLNKNWIDPLPEDESRSLAANMRGMAAAPPEVPEWKKH 562
            .....::|.|:.:     |||            :|...:|:              ||..|     
Mouse    81 SEMEYINKYRQLE-----EQE------------LDIYGQDQ--------------PPSGP----- 109

  Fly   563 VIGGKKSSFGKKTDLTLVEQR----QSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYL 623
               |.:|...|.:::..:.:.    ..|||.:.::::|..:..|.::|:.|.|||||:||:.||:
Mouse   110 ---GLRSPLAKLSNVACIPETTYKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYV 171

  Fly   624 GECGFTARG---KIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDG 685
            .: .:|.|.   .|..||||::.|.|:|:.:::|....||..|||.:..|...:.:|.:.|||.|
Mouse   172 LD-HYTQRSAFCNIVVTQPRKIGASSIARWISKERSWTLGGLVGYQVGLEKIATEDTRLIYMTTG 235

  Fly   686 MLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPE-LKLIVTSATLDAVKFSQY 749
            :||::.:....|..::.|.:||.||||...|.|..:::..::.... :|:::.|||::..:|:.|
Mouse   236 VLLQKIVSAKSLMEFTHIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCKQFADY 300

  Fly   750 FF--------KAPIFTIPGRTFPVEVLY---------------TKEP----ETDYLDASLITVM- 786
            |.        .|.:|.:.|:...:|..|               .:||    :...:..|||.:. 
Mouse   301 FAVPVQNKMNPAYVFEVEGKPHAIEEYYLNDLGHIYHSGLPYRLEEPVITKDVYEVAVSLIQMFD 365

  Fly   787 QIHLRE-------------PPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 838
            .:.::|             ....:|:||.|..||:...|:|...:..      .|.:.|::|::.
Mouse   366 DLDMKESGNKTWSGAQFVSERSSVLVFLPGLGEINYMHELLTNMIHK------RLQVYPLHSSVT 424

  Fly   839 SEMQTRIF-DPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 902
            .|.|..:| .|.| |.||::::|||||:|:|:..:.||:|....:..|.:..|...||.::..|:
Mouse   425 LEEQNNVFLSPVP-GYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASK 488

  Fly   903 AAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPT-PVPEIQRTNLATTVLQLKTMGIND---LLH 963
            .:..||.|||||...|..||| ..|.:.|..:|. .|||:.|..|.:|:|::|.:.:.:   ||.
Mouse   489 TSCDQRKGRAGRVSKGYCYRL-IPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLA 552

  Fly   964 FDFMDAPP----VESLVMALEQLHSLSA---LDDE----GLLTRLGRRMAEFPLEPNLSKMLIMS 1017
            ...  :||    :|..::.|:::.:|:.   .:||    |.||.|||.:|:.|:...|.|::::.
Mouse   553 TAL--SPPSLSDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLG 615

  Fly  1018 VALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFN-QAEGDHLTLLAVYNSW-------- 1073
            ....|.||.|.|.:.||::|.|..|..:.....:.|..|: .:..|.|.|:..:.:|        
Mouse   616 HVFGCLDECLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRGE 680

  Fly  1074 -KNNKFSNAWCYENFVQIRTLKRSQDVRKQLLG--------------IMD-------RHKLDVVS 1116
             :..|....|...|::||:.::...::.::|..              ::|       |..|.||.
Mouse   681 LRRPKDELDWGRLNYIQIKRIREVAELYEELKNRISQFNMFVGPHHPVLDQEYPYKQRFILQVVL 745

  Fly  1117 AGKNSVRIQKAICSGFF-----------RNAAKKDPQEGYRTLVDSQVVYIH-PSSALFNRQPEW 1169
            ||        |....:|           |..|.|||:        :.||..| |        |..
Mouse   746 AG--------AFYPNYFTFGQPDEEMAVRELAGKDPK--------TTVVLKHIP--------PYG 786

  Fly  1170 VIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFS-DPT-------------KLSKFKKNQRL- 1219
            .:|::.:|:......:|.:|    :.:.|.:|..|| :||             |:|:.|.:..| 
Mouse   787 FLYYKQLQSLFRQCGQVKSI----VFDGAKAFVEFSRNPTERFKTLPAVNLAVKMSQLKVSLELS 847

  Fly  1220 ----EPLYNKYEEPNAWRISRVRRRR 1241
                |.:..|.:   ...:|::|..|
Mouse   848 VHAAEEIEGKVQ---GGSVSKLRNTR 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 GH2-like_DHX8 7..74 CDD:409668
S1_DHX8_helicase 285..363 CDD:240189
HrpA 578..>1203 CDD:441249 190/732 (26%)
Tdrd9NP_083332.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..82 12/60 (20%)
HrpA 132..>706 CDD:441249 164/584 (28%)
DEAD-like_helicase_N 134..317 CDD:475120 59/183 (32%)
DEAH box. /evidence=ECO:0000269|PubMed:28633017 256..259 2/2 (100%)
Tudor_TDRD9 906..1006 CDD:410502
Blue background indicates that the domain is not in the aligned region.

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