Protein Alignment pea and dhx40

DIOPT Version :10

• Sequence 1: NP_610928.1
• Gene: pea / 36561
• FlyBaseID: FBgn0086895
• Length: 1242
• Species: Drosophila melanogaster
• Sequence 2: NP_001184155.2
• Gene: dhx40 / 733877
• XenbaseID: XB-GENE-995801
• Length: 744
• Species: Xenopus tropicalis
• Alignment Length: 716
• Identity: 292/716 - (40%)
• Similarity: 431/716 - (60%)
• Gaps: 70/716 - (9%)

  Fly   586 LPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKR 650
            |||::.:.:|:||.|||..|||:|:||||||||:.|||.:.||...|.||.|||||||.:|||:|
 Frog    21 LPIHRWKGELVKAATDNPFLIVMGDTGSGKTTQLPQYLYKAGFGKNGMIGVTQPRRVATISVAQR 85

  Fly   651 VAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHT 715
            ||||..|.||..|||.:||:||||..|:|||||||.|||..|.:.:|..||.|:|||||||::.|
 Frog    86 VAEEMNCSLGSTVGYQVRFDDCTSERTVIKYMTDGCLLRNTLADPDLTKYSTIVLDEAHERSLST 150

  Fly   716 DVLFGLLKTAVQKRP------ELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTK--- 771
            |:||||||...|.|.      .||:||.||||::.|.|.:|...|:.||||:.||::..:..
 Frog   151 DILFGLLKKQFQLRSFKRRKYPLKVIVMSATLESQKLSSFFGNCPVVTIPGKVFPIKERFLNLIG 215

  Fly   772 ---EPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSL-------GPDVP 826
               :..|.|:..::...:|.||.||.||||:|||||.||:.||.:|:::.:.:       ...|.
 Frog   216 PRDKDSTAYVTETVKITLQTHLNEPEGDILVFLTGQAEIERACNLLFKKAEGIDYRHDVYDRSVE 280

  Fly   827 ELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTG 891
            .|:|||:|.::|::.|.|||.|.|:|.||.|::||||.||:||:||.||:|.|||||..||.:.|
 Frog   281 GLLILPLYGSMPTDQQKRIFVPPPSGIRKCVLSTNIAATSVTIEGIRYVIDSGFVKQLNYNPRAG 345

  Fly   892 MDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPT-PVPEIQRTNLATTVLQLKT 955
            :|.|.:.|||::.|.|||||||||.|||.:|:|:|. :.|:.:|. .:|:|:||:||:.:|.||.
 Frog   346 LDILEIVPISKSEAVQRAGRAGRTAPGKCFRIYSEE-FWDKCMPDHMIPDIKRTSLASVILTLKC 409

  Fly   956 MGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVAL 1020
            :.|:|::.|.::|.|....::.||::|:..||:|..|.:|:||..:.||||.|||:..:|.:.:.
 Frog   410 LDIHDVIRFPYLDQPEERHILEALKKLYQCSAIDRTGCVTKLGHFIIEFPLSPNLACAVIKATSF 474

  Fly  1021 QCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAE--------GDHLTLLAVYNSWKNNK 1077
            .|.|.:|.:.:||||::||.:....|   .||:|.....|        .|..|||.::...|.:.
 Frog   475 GCEDLLLPVAAMLSVEHVFIQSGQSQ---KQKEAGLGHEELSQLAGGCNDFATLLYIFEQCKASP 536

  Fly  1078 FSNAWCYENFVQIRTLKRSQDVRKQLLGIMDR---------HKLDVVSAGKNSVRIQKAICSGFF 1133
            ...:||:||.:..|.||.:.:|.|||..|.:|         .|.|    |..:..:::.:|:|:|
 Frog   537 KPASWCHENGIHWRALKSALNVEKQLKEITNRLKQNKDFPVEKFD----GPRNEMLRRCLCAGYF 597

  Fly  1134 RNAAKKDPQEGYRTL-VDSQVVYIHPSSALFNRQP--EWVIYHELVQTTKEYMREVTTIDPKWLV 1195
            .|.|::.....:.|: ....:::||||||||.::.  ||:::|.::.|:|.::|.|..|..:|:.
 Frog   598 SNVARRSVGRTFCTMDGHGSMIHIHPSSALFGKESELEWILFHNVLVTSKIFVRTVCPIRYEWVK 662

  Fly  1196 EFAPSFFRFSDPTKLSKFKK--------------------NQRLEPLYNKYEEPNAWR-ISRVRR 1239
            :..|..... |..:||...:                    |..:|...||.::.|..: ||..|.
 Frog   663 DLLPKLHDI-DAYELSNVAREEVTAEEIIKWESKGETKHCNDGIEEALNKIKKRNDDKSISDARA 726

  Fly  1240 R 1240
            |
 Frog   727 R 727

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pea	NP_610928.1	GH2-like_DHX8	7..74	CDD:409668
		S1_DHX8_helicase	285..363	CDD:240189
		HrpA	578..>1203	CDD:441249	280/656 (43%)
dhx40	NP_001184155.2	HrpA	17..>668	CDD:441249	280/654 (43%)