DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pea and dhx8

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:XP_002932570.2 Gene:dhx8 / 733563 XenbaseID:XB-GENE-6087171 Length:1181 Species:Xenopus tropicalis


Alignment Length:1247 Identity:862/1247 - (69%)
Similarity:1001/1247 - (80%) Gaps:77/1247 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDELQKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPDSLVQ 65
            |||||||||||||||:||||||||||||||||||:|.:..|..|::||:.||..|||||.|||:.
 Frog     6 MDELQKLEYLSLVSKVCTELDNHLGINDKDLAEFVISIAEKATTFETFKSALEKNGAEFTDSLIN 70

  Fly    66 NLQRIINLMRPSRPGGASQEKTVGDKKEDKKSQLLKMFPGLALPNDTYSKKEESDDDEKVKAKPE 130
            ||.|:|..|||......|:|..:  |.:::|.:|.::||.|...::...:.....||.||.|.  
 Frog    71 NLLRLIQTMRPPAKPSTSKETVI--KPKNEKEKLKELFPALCRADNPSVRTMLDPDDVKVAAD-- 131

  Fly   131 KHSETHKKTDMSDVDAAMMELEALAPGEGATLVRPHKEVSSRDRHKRRSRDRDTKRRSRSREDRH 195
                            |:.|||||.|                 :.:|.|:.:|.|:||||     
 Frog   132 ----------------ALQELEALMP-----------------KDERSSKHKDKKKRSRS----- 158

  Fly   196 SDRRRSRSRDKERRRRSRSRDNRRRSRSREDRDRDRDRRHKSSSSRDHHERRRRSRSRSTERRDR 260
                |||.:..:.:|:||||.  :.|:..:||.|.|.|    |..::|......|...:...:::
 Frog   159 ----RSREKGSKHKRKSRSRS--QSSKKTKDRYRSRSR----SPIKEHRNNEHHSDKYAPSWKEK 213

  Fly   261 R-DRSRDCSEKMPPPSAAMTDDPEAGKIYSGKIANIVPFGCFVQLFGLRKRWEGLVHISQLRAEG 324
            . ||        |||     ::|..|.||:||:.:|:.|||||||.|||||||||||||:||.||
 Frog   214 HVDR--------PPP-----EEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREG 265

  Fly   325 RVTDVTEVVTRNQTVKVKVMSITGQKVSLSMKEVDQDSGKDLNP---LSHAPEDDESLRDRNPDG 386
            ||.:|.:||::.|.|||||:|.||.|.|||||:|:||:|:||||   .:...:.:|....||||.
 Frog   266 RVANVADVVSKGQRVKVKVLSFTGCKTSLSMKDVNQDTGEDLNPNRRRNLIGDSNEEASMRNPDR 330

  Fly   387 PFSSSTSMLNLQGNGMEGDEHESRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEETGLLPK- 450
            |  |..|::|  ...:|.|..| |||:|:||.||:|||||||::.||.:.|.||||||||:||| 
 Frog   331 P--SHLSLVN--APEIEDDTLE-RKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKV 390

  Fly   451 -DEDDEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQ 514
             ||:|| |:|||:||||||||.||.:...|:||::|||||||||:|||||||||:|||||.|..|
 Frog   391 DDEEDE-DLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERREMKQAQ 454

  Fly   515 REQEIEAMPTSLNKNWIDPLPEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTL 579
            ||.|::::|..|||:|:||||:.:.|.:||||||:...|.::||||||..||.|:|:||||.:::
 Frog   455 REAEMDSIPMGLNKHWVDPLPDADGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSI 519

  Fly   580 VEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAA 644
            ||||:|||||||::.|::||.|||||||||||||||||||||||.|.|:|.||||||||||||||
 Frog   520 VEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAA 584

  Fly   645 MSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAH 709
            |||||||:|||||.|||||||||||||||||||:||||||||||||||::.:|..|::|||||||
 Frog   585 MSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAH 649

  Fly   710 ERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPE 774
            ||||||||||||||..|||||::||||||||||||||||||::||||||||||:|||:|||||||
 Frog   650 ERTIHTDVLFGLLKKTVQKRPDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPE 714

  Fly   775 TDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPS 839
            ||||||||||||||||.|||||||:||||||||||||||||||||||||||||||||||||||||
 Frog   715 TDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPS 779

  Fly   840 EMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAA 904
            |||||||||||.|||||||||||||||||||||:||||||||||||||||||:|.|||||||||.
 Frog   780 EMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQ 844

  Fly   905 AKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDA 969
            |||||||||||||||.||||||||||||||.|.||||||||||:|||.||.|||||||.||||||
 Frog   845 AKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDA 909

  Fly   970 PPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLS 1034
            ||:|:|:.|:|||::|.||||||||||||||||||||||.|.|||||||.|.||:|:||||||||
 Frog   910 PPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLS 974

  Fly  1035 VQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDV 1099
            ||||||||||||||||||||||:|.|||||||||||||||||||||.||||||:|.|:|:|:||:
 Frog   975 VQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDI 1039

  Fly  1100 RKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN 1164
            |||:|||||||||||||.||.:||:||||||||||||||||||||||||:|.|||||||||||||
 Frog  1040 RKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFN 1104

  Fly  1165 RQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKYEEP 1229
            ||||||:|||||.||||||||||||||:|||||||:||:.||||||||.||.||||||||:||||
 Frog  1105 RQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEP 1169

  Fly  1230 NAWRISRVRRRR 1241
            |||||||..|||
 Frog  1170 NAWRISRAFRRR 1181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189 53/77 (69%)
HrpA 573..1221 CDD:224557 561/647 (87%)
dhx8XP_002932570.2 Pnp 6..463 CDD:224106 254/527 (48%)
S1_DHX8_helicase 226..304 CDD:240189 53/77 (69%)
HrpA 518..1180 CDD:224557 574/661 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 621 1.000 Domainoid score I180
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1657 1.000 Inparanoid score I75
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 1 1.000 - - oto103214
Panther 1 1.100 - - LDO PTHR18934
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R990
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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