DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and Dhx34

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_001272860.1 Gene:Dhx34 / 71723 MGIID:1918973 Length:1145 Species:Mus musculus


Alignment Length:655 Identity:240/655 - (36%)
Similarity:368/655 - (56%) Gaps:53/655 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   511 KMLQREQEIEAMPTSLNKNWI----------DPLPEDESRSLAANMRGM----AAAPPE-VPEWK 560
            |..|::::...||    |:.|          ||........|:.:.||.    ...||| |.|::
Mouse    76 KTSQKKEKDPGMP----KHGIAALADLPLTYDPRYRINLSILSPDTRGRHGPGRGLPPERVSEFR 136

  Fly   561 KHVIG----GKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQ 621
            :.::.    .:|.:||:.  :.|..:|.:|||.:..:.:::.:.::|:::|.|:||.||:||:.|
Mouse   137 RALLHYLDFQQKQAFGRL--VKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQ 199

  Fly   622 YLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGM 686
            ||...||:   .:.||||||:|.:|:||||..|...:.|.:|||.||||...|..|.|.::|.|:
Mouse   200 YLLAAGFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGL 261

  Fly   687 LLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFF 751
            |||:...|..|..|.|:::||.|||.:|.|.|.|:|:..:.:||:||:|:.|||::...||.||.
Mouse   262 LLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFS 326

  Fly   752 KAPIFTIPGRTFPVEVLYTKE------PETDYLD-ASLITVMQ-IHLREPP---GDILLFLTGQE 805
            .||:..:|||.||:.|:|..:      .:::.|| ...:.|:: |..:.||   ||:|:||:|..
Mouse   327 HAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMA 391

  Fly   806 EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTID 870
            ||.|..:.. :...||   ....::||::|||....|.::||.||||.||.:::|||||||:|||
Mouse   392 EITTVLDAA-QAYASL---TQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTID 452

  Fly   871 GIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLP 935
            ||.:|||.|.||:..|:.:..:..|....||||:|:||.|||||||||..||||.|..| |...|
Mouse   453 GIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDY-DAFAP 516

  Fly   936 TPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRR 1000
            .|||||:|..|...|||:|:|.:.|...|.|::.||..|:..|:..|....|||....||.:|..
Mouse   517 YPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGALDSSEALTPIGSL 581

  Fly  1001 MAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLT 1065
            :|:.|::..:.||||:......::.:|||.:.||||:.|.|...........:......:||..|
Mouse   582 LAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPLESDQGDPFT 646

  Fly  1066 LLAVYNSW---KNNKFSNA--WCYENFVQIRTLKRSQDVRKQLLGIMDRHKL----DVVSAGKNS 1121
            |..|:|:|   |:.:..|:  ||....|:...|....::|:|...:::.|.|    .||:.|.:.
Mouse   647 LFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLEDHGLLSGAQVVAPGDSY 711

  Fly  1122 VRIQK 1126
            .|:|:
Mouse   712 SRLQQ 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 221/574 (39%)
Dhx34NP_001272860.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
HrpA 153..>688 CDD:224557 213/544 (39%)
DEAH box 281..284 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 726..764
OB_NTP_bind 800..910 CDD:369483
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1091..1114
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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