DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and Dhx35

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_001359442.1 Gene:Dhx35 / 71715 MGIID:1918965 Length:703 Species:Mus musculus


Alignment Length:705 Identity:324/705 - (45%)
Similarity:463/705 - (65%) Gaps:37/705 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   549 MAAAPPEVPEWKKHV------IGGKKSSFGKKTDLTLV----------EQRQSLPIYKLRDDLIK 597
            |||....|..||...      |..::.|..:.:..|::          :|||.||::|||:.::.
Mouse     1 MAAPLGPVKFWKPGTEGPGVSISEERQSVTENSGTTIIYNPYAALSIEQQRQKLPVFKLRNHILY 65

  Fly   598 AVTDNQILIVIGETGSGKTTQITQYLGECGFTARGK-IGCTQPRRVAAMSVAKRVAEEYGCRLGQ 661
            .|.:.|.::::||||.||:|||.|||.|.|:||.|: :|.||||||||::||.|||:|.|..||.
Mouse    66 LVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGH 130

  Fly   662 EVGYTIRFEDCTSP-ETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTA 725
            ||||.|||:|||.| .|.||::|||||:||.:::..|..|||||||||||||::||:..||||..
Mouse   131 EVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKI 195

  Fly   726 VQKRPELKLIVTSATLDAVKFSQYFFK----------APIFTIPGRTFPVEVLYTKEPETDYLDA 780
            .:||.:|:|||.||||||.||..:|.:          :...|:.||||||::.|.:.|..||:.|
Mouse   196 QKKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTSVTLTVEGRTFPVDIFYLQSPVPDYIKA 260

  Fly   781 SLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPD--VPELIILPVYSALPSEMQT 843
            ::.||::||..|..||||.|||||||::|...:|.|:.::|...  ...|.:||:|:.|||..|.
Mouse   261 TVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQM 325

  Fly   844 RIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQR 908
            ::|:......|||::|||:||||:||.||.||:|.||:|.:.||.:|.::.|||.|:|||:|.||
Mouse   326 KVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQR 390

  Fly   909 AGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVE 973
            |||.||...||.||||||.|: |::..:.|||:||:|||..:||||.:||:::|.|.||..||.:
Mouse   391 AGRGGRNRSGKCYRLYTEEAF-DQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQ 454

  Fly   974 SLVMALEQLHSLSALDDEGLLTR-LGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQN 1037
            |:|.|||.|::|..||.:..||. ||.|:|||||.|..:|||:.|....||.|:|:|.:|:.:||
Mouse   455 SMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEVLSIAAMMQIQN 519

  Fly  1038 VFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSW-KNNKFSNAWCYENFVQIRTLKRSQDVRK 1101
            ||..|.::::.|.:...||...||||||:|.||.:: |:|| |:.||.|:|:..:.|.|:..||.
Mouse   520 VFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEAFIKHNK-SSQWCQEHFLNYKGLVRAATVRD 583

  Fly  1102 QLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF-NR 1165
            ||..::.:.::..||:..:...:.:.|.||||.|||:......|||:.|...::|||:|.|: .:
Mouse   584 QLKKLLVKFQVPKVSSEGDPDPVLRCIVSGFFANAARFHSSGAYRTIRDDHELHIHPASVLYAEK 648

  Fly  1166 QPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLE 1220
            .|.||||:|::||:|.|||:||.|:..||:|.||.|::  ..|.||...|..:::
Mouse   649 PPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQ--QGTHLSLKAKRAKVQ 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 316/675 (47%)
Dhx35NP_001359442.1 HrpA 21..682 CDD:224557 311/662 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100085
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

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