DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pea and dhx8

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:XP_002663993.1 Gene:dhx8 / 606595 ZFINID:ZDB-GENE-050809-39 Length:1210 Species:Danio rerio


Alignment Length:1252 Identity:889/1252 - (71%)
Similarity:1011/1252 - (80%) Gaps:60/1252 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DELQKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPDSLVQN 66
            |||:||||||||||:||||||||||||||||||:|.|..||..:|.|:.||:.|||:|.|||:.|
Zfish     7 DELKKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTAFDGFKSALVKNGADFTDSLIGN 71

  Fly    67 LQRIINLMRPSRPGGASQEKTVGDKKEDKKSQLLKMFPGLALPNDTYSKKEESDDDEKVKAKPEK 131
            |.|:|..|||......|:......|.:::|.:|.::||.|..|::..::....:||.||.|.   
Zfish    72 LLRLIQTMRPPAKASTSKASFPAAKPKNEKDKLKELFPALCRPDNPTTRNMLDEDDVKVAAD--- 133

  Fly   132 HSETHKKTDMSDVDAAMMELEALAPGEGATLVRPHK---EVSSRDRHKRRSRDRDTKRRSRSRED 193
                           ||.|||...|....|.....|   |.||..|.|||||.     |||.| |
Zfish   134 ---------------AMKELEMFMPSVSGTEPSSSKHRSETSSSSRKKRRSRS-----RSRDR-D 177

  Fly   194 RHSDRRRSRSRDKERRRRSRSRDNRRRSRSREDRDRDRDRRHKSSSSRDHHERRRRSRSRSTERR 258
            |..||.|.|.||::||||.||| :|.||||.|     ||||.:  .||.|    .||||||..|.
Zfish   178 RDRDRDRERDRDRDRRRRHRSR-SRSRSRSNE-----RDRRKR--RSRWH----SRSRSRSPART 230

  Fly   259 DR---RDRSRDCSEKMPPPSAAMTDDPEAGKIYSGKIANIVPFGCFVQLFGLRKRWEGLVHISQL 320
            ||   .||.:|.....|||     ::|....||:||:.:|:.|||||||.|||||||||||||:|
Zfish   231 DRDKGSDRWKDKHVDRPPP-----EEPSVADIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL 290

  Fly   321 RAEGRVTDVTEVVTRNQTVKVKVMSITGQKVSLSMKEVDQDSGKDLNP---LSHAPEDDESLRDR 382
            |.||||.:|.:||::.|.|||||:|.||.|.|||||:||||:|:||||   .:...|..|....|
Zfish   291 RREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNVGGEGQEESAMR 355

  Fly   383 NPDGPFSSSTSMLNLQGNGME-GDEHESRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEETG 446
            |||.|     :.||| |:..| .|:...|||:|:||.||:|||||||::.||.:.|.||||||||
Zfish   356 NPDRP-----TNLNL-GHAPEVEDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDEETG 414

  Fly   447 LLPK--DEDDEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERRE 509
            :|||  ||:|| |:|||:||||||||.||.:...|:|||:|||||||||:|||||||||:|||||
Zfish   415 ILPKVDDEEDE-DLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERRE 478

  Fly   510 QKMLQREQEIEAMPTSLNKNWIDPLPEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGKK 574
            .|..|||.|::::|..|||:|:||||:.:.|.:||||||:...|.::||||||..||.|:|:|||
Zfish   479 VKQAQREAEMDSIPMGLNKHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKK 543

  Fly   575 TDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQP 639
            |.|:::|||:|||||||::.||:||.|||||||||||||||||||||||.|.|:|.|||||||||
Zfish   544 TQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQP 608

  Fly   640 RRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIM 704
            ||||||||||||:|||||.|||||||||||||||||||:||||||||||||||::.:|..|::||
Zfish   609 RRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQYAIIM 673

  Fly   705 LDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLY 769
            |||||||||||||||||||..||||.::||||||||||||||||||::||||||||||:||||||
Zfish   674 LDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLY 738

  Fly   770 TKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVY 834
            |||||||||||||||||||||.|||||||:|||||||||||||||||||||||||||||||||||
Zfish   739 TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVY 803

  Fly   835 SALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTP 899
            ||||||||||||||||.|||||||||||||||||||||:||||||||||||||||||:|.|||||
Zfish   804 SALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTP 868

  Fly   900 ISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHF 964
            ||||.|||||||||||||||.||||||||||||||.|.||||||||||:|||.||.|||||||.|
Zfish   869 ISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSF 933

  Fly   965 DFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTI 1029
            |||||||:|:|:.|:|||::|.||||||||||||||||||||||.|.|||||||.|.||:|:|||
Zfish   934 DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTI 998

  Fly  1030 VSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLK 1094
            |||||||||||||||||||||||||||:|.|||||||||||||||||||||.||||||:|.|:|:
Zfish   999 VSMLSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1063

  Fly  1095 RSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPS 1159
            |:||:|||:|||||||||||||.||.:||:||||||||||||||||||||||||:|.||||||||
Zfish  1064 RAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPS 1128

  Fly  1160 SALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLYN 1224
            |||||||||||:|||||.||||||||||||||:|||||||:||:.||||:|||.||.||||||||
Zfish  1129 SALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYN 1193

  Fly  1225 KYEEPNAWRISRVRRRR 1241
            :|||||||||||..|||
Zfish  1194 RYEEPNAWRISRAFRRR 1210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189 53/77 (69%)
HrpA 573..1221 CDD:224557 561/647 (87%)
dhx8XP_002663993.1 S1_DHX8_helicase 257..333 CDD:240189 53/75 (71%)
HrpA 542..1209 CDD:224557 577/666 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579320
Domainoid 1 1.000 282 1.000 Domainoid score I1617
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1663 1.000 Inparanoid score I72
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 1 1.000 - - otm25372
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - LDO PTHR18934
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R990
SonicParanoid 1 1.000 - - X141
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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