DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pea and dhx30

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:XP_021322211.1 Gene:dhx30 / 570735 ZFINID:ZDB-GENE-130530-833 Length:1173 Species:Danio rerio


Alignment Length:1279 Identity:304/1279 - (23%)
Similarity:515/1279 - (40%) Gaps:350/1279 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 SKKEESDDD--------EKVKAKPE-----KHS--ETHKKTDMSDVDAAMMELEALAPGEGATLV 163
            ||..|.:.|        .:.::||:     :||  ||..|.....:.|..:....|:...|.:.|
Zfish    18 SKTLEINKDIRSRWAFIRQYRSKPDVVHTRRHSPPETINKAHPDYLHAKNLLYNTLSRSVGLSNV 82

  Fly   164 RPHKEVSSRDRHKRRS--------RDRDTKRRSRSREDRHSDRRRSRSRDKERRRRSRSRDNRRR 220
            ..:.:.|..|...:|:        |.......||.:|   ::|..:.:..::..........:||
Zfish    83 SQYLKFSCTDGEVKRATVTLLWPVRIETEGFGSRKQE---AERNAAAAALQKLCELGVYAPGKRR 144

  Fly   221 SRSREDRDRDRDRRHKSSSSRDHHERRRRSRSRSTERRDRRDRSRDCSEKMPPPSAAMTDDPEAG 285
            ..:...|.:||      .:|...:|.....:|...:::.::||:....|:....|.|:...|.. 
Zfish   145 QEAGMLRMKDR------QTSLCDNEEENHLQSLPIQKKTQKDRAHGLVEEDSRLSEALAIFPRP- 202

  Fly   286 KIYSGKIANIVPFGCFVQLFGLRKRWEGLVHISQLRAEGRVTDVTEVVTRNQTVKVKVMSI---- 346
            :...|.:..:....|                        ||.|:.:..|....|||..:::    
Zfish   203 RTLLGSVIQVATSSC------------------------RVRDLLQYKTSGGKVKVCELNVLWPT 243

  Fly   347 ------TGQK-----------VSLSMKE---VDQDSGKDLNPLSHAPEDDESLRDRNPDGPFSSS 391
                  :|::           ..|.:||   :|:.:    .||:||....:.:|:          
Zfish   244 PMTFTASGRRRLEAEANAAALACLKLKELNLLDEQN----KPLTHARYHQDQVRE---------- 294

  Fly   392 TSMLNLQGNGMEGDEHESRKRVTRISSPERWE--IKQMISSGVLDRSEMPDFDEETGLLPKDEDD 454
                       .|:.|   ::..|:..||:.|  |:|.:|...::......:|||          
Zfish   295 -----------AGERH---RQPCRMQIPEQLELRIQQYLSQYPVEAEVQKLWDEE---------- 335

  Fly   455 EADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEI 519
                                            ::...|::.||                      
Zfish   336 --------------------------------EHQSSSISTAA---------------------- 346

  Fly   520 EAMPTSLNKNWIDPLPEDESRSLAANMRGMAAAPPEVPE---------WKKHVIGGKKSSFGKKT 575
                        |...|||..:.|...:...|..|:..|         ||:  :|..:.:     
Zfish   347 ------------DDYDEDEFITDAITSKPYRALEPKEAEHLSQRLLSMWKR--VGPARGA----- 392

  Fly   576 DLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGK-----IG 635
                     .||:...::.:::||..:|::::.||||.||||:|.::|.|.| ..||:     :.
Zfish   393 ---------ELPVDAHKESILEAVRSSQVVVISGETGCGKTTRIPRFLLEDG-VLRGEGAECNVL 447

  Fly   636 CTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPET---IIKYMTDGMLLRECLMEAEL 697
            .|||||::|:|||:|||.|.|..|...|||.:|.|. ..||.   .:.::|.|:||::......|
Zfish   448 VTQPRRISAVSVAQRVAHEIGPALQHCVGYQVRLES-RPPERSGGALLFLTLGVLLKKLQSNPRL 511

  Fly   698 KSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRT 762
            :..|.:::||.|||.:.||:|..||:..:..|||||:::.||:.|:.:.:|||...|:..:||..
Zfish   512 EGISHVIVDEVHERDVQTDLLLHLLRCVLSLRPELKVLLMSASGDSQRLAQYFGGCPVLRVPGFM 576

  Fly   763 FPVEVLYTKEPETDY------------------------------LDASLITVMQIHLREPPGDI 797
            .||...:.::.:.|.                              ||.....:..||....||.:
Zfish   577 HPVRARFLEDMQLDSRRPLLDMGSTQWSAEVRGRMGKEENNVTPDLDLVADVIDHIHRTGEPGAV 641

  Fly   798 LLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNI 862
            |.||.|.:||....:.|.|:.....   ...||||::|::....|..:|...|||.||:|:||||
Zfish   642 LCFLPGWQEIKAVQQQLEEKQAYRS---GSQIILPLHSSMAVSEQQVVFQRPPAGQRKIVLATNI 703

  Fly   863 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTER 927
            ||||:|||.|.:|||.|..|::.|:.:|.:.:|....||||...||.|||||..||.:|.|: .|
Zfish   704 AETSITIDDIVHVVDAGVQKEQNYDPRTKVSALNTVWISQANVTQRRGRAGRCQPGHSYHLF-PR 767

  Fly   928 AYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHF------DF----MDAPPVESLVMALEQL 982
            ...:.|.|.|||||.||.|.:.|:|.|       :|.      ||    :|:|..:::..|::.|
Zfish   768 KQLERMEPFPVPEILRTPLESVVMQAK-------IHCPESKAEDFLSQVLDSPDTQAVRTAVKNL 825

  Fly   983 HSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQA 1047
            ..:..||....||.||..::....:|.|.|:|:.|....|...:|::|:.|: ::.||.....:.
Zfish   826 MDIGVLDASEDLTPLGHHVSCMSCDPRLGKVLVFSALFSCVQPVLSVVACLT-RDPFYNSLQNRT 889

  Fly  1048 LADQKKAKFNQAEG-DHLTLLAVYNSWKN----------------------------NKFSNAWC 1083
            |..:.||:.:.:.| |:|....|..||:.                            .:||:..|
Zfish   890 LVSKAKAELSGSSGSDYLVFSRVVQSWREQHSRDSRQDYLDKHTLSGASLRFIHGLMQQFSDNLC 954

  Fly  1084 YENFV-------QIRTLKRSQDVRKQLLGIMDRHKLDVVSAG--KNSVRIQKAIC--SGFFR--N 1135
            ....|       ::.:....|...:||:       ..|:.||  .|.::::|.:.  ||.||  |
Zfish   955 EAGLVDHSAECLRLSSPVNQQSKEEQLI-------TAVLLAGLYPNLIQVKKGVVTKSGRFRAEN 1012

  Fly  1136 AAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ---PEWVIYHELVQTTKE-YMREVTTIDPKWLVE 1196
            .:       :||  :|..|.:|.||...::|   ..|:.:...|:::.: ::|:.|.:.|..|: 
Zfish  1013 VS-------FRT--ESGPVLLHRSSVNRDKQHLWSRWLTFFSAVKSSGQVFIRDSTVVHPLALL- 1067

  Fly  1197 FAPSFFRFSDPTKLSKFKKNQRLE-----PLYNKYE-EPNAWRI 1234
                   ......||:.....|:|     |...::| .|..|.:
Zfish  1068 -------LLTDCDLSERVVGDRVEVALPGPALIRWEFSPAVWEL 1104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189 14/101 (14%)
HrpA 573..1221 CDD:224557 218/746 (29%)
dhx30XP_021322211.1 HrpA 371..>929 CDD:224557 187/587 (32%)
OB_NTP_bind 947..1069 CDD:311586 31/145 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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