DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and dhx34

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:XP_017207416.1 Gene:dhx34 / 555838 ZFINID:ZDB-GENE-061207-30 Length:1154 Species:Danio rerio


Alignment Length:861 Identity:260/861 - (30%)
Similarity:410/861 - (47%) Gaps:189/861 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   495 QAAMMQSALSKERREQKMLQREQEIEAMPTSLNKNWIDPLPED----------------ESRSLA 543
            :|....:|....|:|:.:..||.:.:.....::..    ||:|                |.|...
Zfish    54 KAKKEMTASKSSRQEKHVALREGKAKKKTGCVDLG----LPKDYDARYRINISVCSRDIEERLAG 114

  Fly   544 ANMRGMAAAPP---EVPEWKKHVIG----GKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTD 601
            ::.|...::.|   |:.:.:..::.    .:|.||.|.:.|.  .:::||||::.||.:::.|..
Zfish   115 SDHRRRESSGPGRQEITDGRLALLHFLDFNQKQSFSKLSKLR--REQKSLPIFQYRDKIVELVRT 177

  Fly   602 NQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYT 666
            :.:::|.|:||.||:||:.|||...|.   ..|.||||||:|.:|:||||:.|...:.|.:|||.
Zfish   178 HPVVVVAGDTGCGKSTQVPQYLLASGI---NNIACTQPRRIACISLAKRVSFESLNQYGSKVGYQ 239

  Fly   667 IRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPE 731
            ||||...:..|.:.::|:|:|||:...:|.|..|.|:::||.|||.:|.|.|.|:|::.:..||:
Zfish   240 IRFETSRTLATKLLFLTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPD 304

  Fly   732 LKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDAS-----------LITV 785
            |:|::.|||::...||.||..||:..:|||.||::|:|...|..:.:..|           |..:
Zfish   305 LRLVLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGI 369

  Fly   786 MQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP 850
            .|.:.:|..||:||||:|..||.|    :.|..::........|:||::|.|....|.::||.||
Zfish   370 DQRYPQEERGDLLLFLSGVAEIST----IQEACQTYATHTQRWIVLPLHSTLSLAQQDKVFDIAP 430

  Fly   851 AGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRT 915
            .|.||.:|:|||||||:||||:.:|||.|.||:..::.|..|..|....||:|:::||.||||||
Zfish   431 PGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRT 495

  Fly   916 GPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALE 980
            |||..||||:|..| |...|.|||||.|..|.:.:||:|:||:.|...|.|:|.||..|:..|:.
Zfish   496 GPGVCYRLYSESDY-DAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPPASSIQTAVT 559

  Fly   981 QLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDK 1045
            .|....|||:.|.||.:||.:|:.|::..:.|||::.......:.:||:.:.||||:.|.|....
Zfish   560 YLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALSVQSPFLRSAQH 624

  Fly  1046 QALADQKKAKFNQAEGDHLTLLAVYNSWKNNKF-----SNAWC---------------------- 1083
            .......:...|...||..||:..:|:|...|.     |..||                      
Zfish   625 NPDCSTARQPLNSNHGDPFTLMNTFNAWVQVKADRGSGSRKWCRRRGLEEQRLYEMVNLRRQFKE 689

  Fly  1084 ------------------------YENFVQIRTL------------------------------- 1093
                                    .|.|.:.:.|                               
Zfish   690 LLRSHGLLEDDTGRATEPQDRARRRERFTERQKLHQLKRDHELQENTKRKVLRLEEGLEGDASSG 754

  Fly  1094 ----------KRSQDVRKQLLGIMD-----RHKLD------VVSAGKNSVR---IQKAICSGFF- 1133
                      |:.:|..:|.:.|.:     ||.::      ..||..:|::   ::..:|.|.: 
Zfish   755 SDAEESSTSRKKRKDGAEQTMDIQEVKFKLRHNVNELQESAYASAALSSLQQALLKLLLCRGLYP 819

  Fly  1134 -------RNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIY---HE-------------- 1174
                   .||.:||..:.:.|. :.|.|.|||:| :|...|| |::   ||              
Zfish   820 QLAIPDEHNATRKDSDQVFHTR-NKQGVVIHPTS-VFASDPE-VLHVPEHETSEFGTDKGQSNRH 881

  Fly  1175 -------LVQTTKEYM 1183
                   |::|.|.|:
Zfish   882 QLLAFVTLLETNKPYL 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 243/760 (32%)
dhx34XP_017207416.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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