DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and dhx33

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:XP_002932324.1 Gene:dhx33 / 447985 XenbaseID:XB-GENE-949473 Length:678 Species:Xenopus tropicalis


Alignment Length:675 Identity:310/675 - (45%)
Similarity:436/675 - (64%) Gaps:25/675 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   552 APPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKT 616
            :||..|:.:..:..|.|.       :|:.|||:|||||..|..:|..:.....:::|||||||||
 Frog    18 SPPVKPKMQAAIHCGPKK-------MTVEEQRRSLPIYLARSQIIAQLRKLDSVVIIGETGSGKT 75

  Fly   617 TQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKY 681
            |||.|||.|.....:..|..||||||||:|:|.||:||....|.:.||||:||||.||.||.||:
 Frog    76 TQIPQYLYEASIGRQSIIAVTQPRRVAAISLATRVSEERRTELSKLVGYTVRFEDVTSEETKIKF 140

  Fly   682 MTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPE-----LKLIVTSATL 741
            :||||||||.:.:..|:.|||::||||||||||||||||::|:|.:||.|     ||:|:.|||:
 Frog   141 LTDGMLLREAIGDPLLRKYSVVILDEAHERTIHTDVLFGVVKSAQKKRKEQEKQPLKIIIMSATM 205

  Fly   742 DAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPG-DILLFLTGQE 805
            |...||:||..||:..:.||..|:::.||||.::|||.|:|:||.|:|...|.. |||:||||||
 Frog   206 DVDLFSEYFNGAPVLYLEGRQHPIQIFYTKESQSDYLQAALVTVFQVHQEVPASHDILVFLTGQE 270

  Fly   806 EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTID 870
            ||:...:...:..|.|..|.|:::::|:|::||...|.|:|..||.|.|||:::|||||||:||.
 Frog   271 EIEAMTKTCRDISKHLPDDCPKMVVMPLYASLPHSQQLRVFQNAPKGQRKVILSTNIAETSITIP 335

  Fly   871 GIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYR--DEM 933
            ||.||||.|.||.|.||.::|::.|.|..:|:|.|.||.|||||...|..||||.|..:.  :||
 Frog   336 GIKYVVDTGMVKAKKYNPESGLEVLAVQKVSKAQAWQRTGRAGREDSGICYRLYKEEEFEKFEEM 400

  Fly   934 LPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEG---LLT 995
               .||||||.|||:.:|||..:.:.::..||||..|..:|:..|::|||.|.|::.:|   :||
 Frog   401 ---TVPEIQRCNLASVMLQLLVLRVPNVHTFDFMSKPSPDSIQAAIDQLHLLGAVERKGDQIVLT 462

  Fly   996 RLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAE 1060
            .||::||.|||||..||.:::|....|::|||||||:|||.:|.:.|..|:......:.||..:|
 Frog   463 PLGKKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSVDSVLHNPASKRDEVQAARKKFISSE 527

  Fly  1061 GDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQ 1125
            |||:|||.:|.::||...:..||.|||:..|.:....:||.||..|..:..:.:.|:..::..|:
 Frog   528 GDHITLLNIYRAFKNLGKNKDWCRENFINGRNMTMVLEVRSQLRDICIKLSMPMESSRTDTRNIR 592

  Fly  1126 KAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTID 1190
            :.:..|.|.:||:..|...|.|:...|.:.|||||.||:.:|..|:|:||:.|:|.|||::..:|
 Frog   593 QCLAHGLFMHAAELQPDGTYTTVDTHQPIAIHPSSILFHCKPACVVYNELLHTSKCYMRDLCVVD 657

  Fly  1191 PKWLVEFAPSFFRFSDPTKLSKFKK 1215
            ..||.|.||.:||    .||...||
 Frog   658 ADWLFEAAPDYFR----RKLRTTKK 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 305/654 (47%)
dhx33XP_002932324.1 HrpA 38..667 CDD:224557 297/631 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53574
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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