DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and Dhx32

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_001123511.1 Gene:Dhx32 / 361667 RGDID:1311740 Length:751 Species:Rattus norvegicus


Alignment Length:659 Identity:225/659 - (34%)
Similarity:370/659 - (56%) Gaps:30/659 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFT---ARGKIGCTQPR 640
            |:::|:.|||:|.:...::::..||:::|.|::..||::|:.|:..|...:   ..|.:.|||..
  Rat    62 LLKEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICTQVH 126

  Fly   641 RVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIML 705
            :..|:.:|.|||:|....:|.||||.|.||:|.:.|||::|.||.||.||.:....|.||.||:|
  Rat   127 KQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGSYGVIIL 191

  Fly   706 DEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYT 770
            |:.|||::.||||.||||..:..|||||||:..:.....:.|.|:...|:..:..: .||||:|.
  Rat   192 DDVHERSLATDVLLGLLKDVLLARPELKLIINCSPFLISRLSSYYGNVPLLEVRNK-HPVEVVYL 255

  Fly   771 KEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYS 835
            ...:.|..::.:..:.:||.....||:::||..:::|:...||:.:...:|.|||.||:::|:| 
  Rat   256 SGAQKDPFESVVRLIFEIHRSGEQGDVVVFLACEQDIEKTYEIVCQEGSNLNPDVGELVVIPLY- 319

  Fly   836 ALPSEMQTRIFDP-------APAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMD 893
              |.| :..:|.|       ..|..|:||:.|:..|:.:....:.:|:|.|..:::|||.:...:
  Rat   320 --PKE-KCSLFRPVDETEKRCQASQRRVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRAN 381

  Fly   894 SLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGI 958
            |||:.||||:.|:.|....|.:..||.:.||||.....:|.|....|:|..||.:.||.:|.:.|
  Rat   382 SLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDI 446

  Fly   959 NDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCS 1023
            ..|...|||:.|..|||:.|||.|..|:|||::|.|:..|..|:||||:|.|||.::.|....|.
  Rat   447 AGLGRCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCV 511

  Fly  1024 DEILTIVSMLSVQNVF-YRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNA------ 1081
            ||:|||.:|::..:.| :.|...:..|......|...||||.||:.:||::::...::|      
  Rat   512 DEMLTIAAMVTAPSCFLHVPHGAEEAAVTCWKTFLHPEGDHFTLINIYNAYQDTVLNSANEHCVE 576

  Fly  1082 -WCYENFVQIRTLKRSQDVRKQLLGIMDRHKL----DVVSAGKNSVRIQKAICSGFFRNAAKK-D 1140
             ||:..|:....|:.:..:|.:||.|:.|.:|    ....:.:|.:.|:||:.||:|...|:. |
  Rat   577 TWCHNCFLSCSALRMADVIRAELLEIIKRIELPYAEPAFGSQENGLNIKKALLSGYFMQIARDVD 641

  Fly  1141 PQEGYRTLVDSQVVYIHP--SSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFR 1203
            ....|..|...||..:||  |.|:..:.||||::|:...:...|:|..:.:.|:..::..|.::.
  Rat   642 GSGNYLMLTHKQVAQLHPLSSYAITKKMPEWVLFHQFSISENNYIRVTSAVSPELFMQLVPQYYF 706

  Fly  1204 FSDPTKLSK 1212
            .:.|...||
  Rat   707 SNLPPSESK 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 225/659 (34%)
Dhx32NP_001123511.1 HrpA 19..687 CDD:224557 219/629 (35%)
DEXDc 86..202 CDD:238005 47/115 (41%)
HA2 472..556 CDD:214852 33/83 (40%)
OB_NTP_bind 597..704 CDD:285018 31/106 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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