DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and CG4901

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_001334733.1 Gene:CG4901 / 34357 FlyBaseID:FBgn0032194 Length:694 Species:Drosophila melanogaster


Alignment Length:675 Identity:278/675 - (41%)
Similarity:413/675 - (61%) Gaps:24/675 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   549 MAAAPPEVPEWKKHVIGGKKS-----SFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVI 608
            ||.:|  :.|.|.||...|::     ...|:|  ::.:|::|||::..|..::|.:..|..::::
  Fly    30 MANSP--ILEKKPHVAQIKQTIAPILLTSKRT--SIEQQQKSLPVFNCRHRILKELEANDTVLIM 90

  Fly   609 GETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCT 673
            .||||||||||.|:|...|:...|.||.||||||||::||:|||:|....:|..||||:||||.|
  Fly    91 SETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVT 155

  Fly   674 SPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTA-----VQKRPELK 733
            |..|.|:::|||:||||.:.:..|..||||:||||||||::.|:|||::|.|     .||...||
  Fly   156 SRATKIRFLTDGVLLRESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLK 220

  Fly   734 LIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPG-DI 797
            ::|||||:|...|..||....:: :.|||:||.|::|||...||:...|:|:..||...|.. |:
  Fly   221 VVVTSATMDIDHFGNYFNCKGMY-LEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDV 284

  Fly   798 LLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNI 862
            |:||||||||::..:.:.:..|.......:|.:..:|:.|....|...|.|.||..|||::||||
  Fly   285 LIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNI 349

  Fly   863 AETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTER 927
            ||||:||.||..|:|.||||:|.:|:..|:|.|....||:|.|.||||||||...|..||.|| :
  Fly   350 AETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYT-K 413

  Fly   928 AYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSAL--DD 990
            |..|.......|||.|||..:.||||..:.| |..:|||:|.|..:.|..|.:.|.:|.|:  .|
  Fly   414 AEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIKTGD 477

  Fly   991 EGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAK 1055
            :..:|.|||:|.::||:|..||:|:.:.:..|.:|||::||:||..:||....:|..:|....||
  Fly   478 DSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVSNSEKNEMAALAHAK 542

  Fly  1056 FNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKN 1120
            |....|||||||.|:|.:..::....||::|::.:|:|..:::||:||..|.:...| .:::..:
  Fly   543 FQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHL-ALNSSDD 606

  Fly  1121 SVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNR-QPEWVIYHELVQTTKEYMR 1184
            ...::|.|.:|||.|.|.......|.|...:....|||||.|..: :|.::::.|:|||.:.::|
  Fly   607 IEMLKKCILNGFFENIAVLQRDGFYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLR 671

  Fly  1185 EVTTIDPKWLVEFAPSFFRFSDPTK 1209
            :||.|..:|:.|..|  |..:.||:
  Fly   672 QVTEISIEWIKEVVP--FVKNIPTR 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 270/646 (42%)
CG4901NP_001334733.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468070
Domainoid 1 1.000 55 1.000 Domainoid score I637
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I130
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D13788at6656
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 1 1.000 - - otm51353
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.800

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