DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pea and CG3225

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_608860.1 Gene:CG3225 / 33680 FlyBaseID:FBgn0031631 Length:678 Species:Drosophila melanogaster


Alignment Length:668 Identity:290/668 - (43%)
Similarity:424/668 - (63%) Gaps:24/668 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   554 PEVPEWKKHVIGGKKSS----FGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSG 614
            ||..:......||::.|    |....::.|:|||:.|||.:.||.::..:..:|::|::||||||
  Fly    11 PETDDAITDSAGGEQQSSAFVFNVNHNMGLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSG 75

  Fly   615 KTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETII 679
            |:||:.|||.|.|:..:|.||.|:||||:.:::|.|||:|.|..:|..|||.:||.:..|..|.|
  Fly    76 KSTQVPQYLYEWGWHTKGLIGITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKI 140

  Fly   680 KYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAV 744
            |:||:|:||||.|.:..|..|.||::||||||.:.||::.||||..::||..||||::|||:||.
  Fly   141 KFMTEGILLREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDAS 205

  Fly   745 KFSQYFFKAP-------IFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLT 802
            .||: ||..|       ..:|.||..||...|..||..||:..::.||.::|.:|||||||.|||
  Fly   206 FFSE-FFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLT 269

  Fly   803 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSL 867
            ||||:..|.::|.|.:.|  .:...|.:||:|.::.|..|..:|...|.|:||||:||||||||:
  Fly   270 GQEEVLEALDLLREYIAS--SEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSI 332

  Fly   868 TIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDE 932
            ||.||.||:|.|:||.|.||.||..||||:.|:|:|:|.||||||||..|||.|||||:..| :.
  Fly   333 TIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDY-EA 396

  Fly   933 MLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTR- 996
            :.|...||::|:.|:..:||||.:||.::|.|||...||.::|:.|||.|.:|.|:|::|.||: 
  Fly   397 LAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKP 461

  Fly   997 LGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQK----KAKFN 1057
            :|..:||.|....|||||.:|..:.||:||:||:::|.||::|.||  ..|:|.|.    ..||.
  Fly   462 VGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRP--ASAVAQQSGRIAHRKFE 524

  Fly  1058 QAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGI-MDRHKLDVVSAGKNS 1121
            .||||.:|:|..|..:.....:..:|.:.|:..|.|||:..:|:||:.: ..::.:.:.|...:.
  Fly   525 VAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITVARKKYGIPIFSCKGDV 589

  Fly  1122 VRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFN-RQPEWVIYHELVQTTKEYMRE 1185
            .::.|.|.:|||...|.......||.:.....:.|||:|.|:. .|.::|:|.||:||||.:|..
  Fly   590 EKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYTLPQAQYVVYGELLQTTKLFMNY 654

  Fly  1186 VTTIDPKWLVEFAPSFFR 1203
            ||.|..:||.|.||.:::
  Fly   655 VTVIKREWLTELAPHYYQ 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 284/645 (44%)
CG3225NP_608860.1 HrpA 40..668 CDD:224557 282/633 (45%)
DEXDc 64..202 CDD:238005 72/137 (53%)
HELICc 289..380 CDD:197757 51/90 (57%)
HA2 448..534 CDD:214852 38/87 (44%)
OB_NTP_bind <581..670 CDD:285018 32/88 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468079
Domainoid 1 1.000 96 1.000 Domainoid score I378
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I130
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D13788at6656
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 1 1.000 - - otm51353
orthoMCL 1 0.900 - - OOG6_100085
Panther 1 1.100 - - P PTHR18934
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.800

Return to query results.
Submit another query.