DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pea and CG32533

DIOPT Version :10

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_728244.1 Gene:CG32533 / 32933 FlyBaseID:FBgn0052533 Length:1139 Species:Drosophila melanogaster


Alignment Length:972 Identity:273/972 - (28%)
Similarity:437/972 - (44%) Gaps:268/972 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 EGDEHESRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEETGLLPKDEDDEADIEIEIVEEEP 467
            :.|||.|.:|.|:|:         :|....||...     |..|||   :.....:...:||.|.
  Fly     7 KADEHASSRRRTQIN---------LIEFSFLDHKA-----ELVGLL---QAKSRQVGRSLVENEA 54

  Fly   468 PFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQ---REQEIEAMPTSLNKN 529
            .|....|:                   ..|||:|.      .|.:|.   .|.|:.:|.      
  Fly    55 DFWKFVGK-------------------YEAMMRST------GQPVLPPRLAEAELSSMQ------ 88

  Fly   530 WIDPLPEDESRSLAANMRG---MAAAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQ------- 584
                 |...|:.||..:..   :..|..::....:|::            |..::.||       
  Fly    89 -----PYHRSKHLALRLDADELLQEARDQMQSQFRHIL------------LVYLDFRQTEKFQRI 136

  Fly   585 --------SLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRR 641
                    :|||.:.|.||.:|:..::::||.|:||.||:||:.|||.:.|:.:   |.||||||
  Fly   137 RKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS---IACTQPRR 198

  Fly   642 VAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLD 706
            :|.:|:.||||.|.....|..|.:.||||...:..|.|.::|:|:|||:..:.|.|..|..::||
  Fly   199 LACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLDQYDALILD 263

  Fly   707 EAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFK--APIFTIPGRTFPVEVLY 769
            |.|||.:..|.|.|:.|..::.||:||||:.|||::...|..||.:  |.:..:|||.||:::.|
  Fly   264 EIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLVQVPGRLFPIKLRY 328

  Fly   770 --------------TKEPETDYLD-ASLITVMQIHLREPP----GDILLFLTGQEEIDTACEILY 815
                          :|..:.:.:| |..:.|:.:..::.|    ||:|:|::|..||::..|.::
  Fly   329 LPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSERGDVLIFVSGVNEIESVVEAVH 393

  Fly   816 ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGF 880
            |    ...:....::||::|......|:::||.||.|.||.:::|||||||||:||:.:|||.|.
  Fly   394 E----YATEQTHWLVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGK 454

  Fly   881 VKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRD-EMLPTPVPEIQRT 944
            ||:..:::......|....:|:::|.||.|||||||||..:||||...|.. |..||  |||.|.
  Fly   455 VKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAFEAYPT--PEIYRV 517

  Fly   945 NLATTVLQLKTMGINDLLHFDFMDAPP---VESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPL 1006
            .|.|.:||:.:||:.|:..|.|::||.   :|..::||:|..:||.   |..:|.|||.:|..|:
  Fly   518 PLDTMLLQMVSMGLPDVRAFPFIEAPETERIEQTILALKQHCALSV---EEKITPLGRSLANLPV 579

  Fly  1007 EPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQA-EGDH---LTLL 1067
            |.::.|||:|.......:::||:.:||||||    |...:|..||:..:..:: |.||   .||:
  Fly   580 ELSIGKMLLMGSVFPEVEQLLTLAAMLSVQN----PLTNRAHTDQRCVRERESLESDHGDLFTLV 640

  Fly  1068 AVYNSWKNNKF----SNAWC----------YE--------------------------------- 1085
            .:||.|...|.    :..||          ||                                 
  Fly   641 RLYNVWVQLKMRRDGTRQWCRRLGIEEQRFYEVTKLRQQFQRILESCGMVVASDSDSQLTSAERA 705

  Fly  1086 ----NFVQIRTLKRSQ-------------------------------DVR----------KQLLG 1105
                ...|::.:||.|                               |:|          :||..
  Fly   706 TRHGELRQLKAMKRRQRFEQPRQRKLLKQSAGRVAEDEEEQEEAQGDDMRDVDFRLRFDPRQLAL 770

  Fly  1106 I-----MDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDP--------QEGYRTLVDSQVVYIH 1157
            :     :|||.:.|:        ::..:.|||:...|..|.        |:.:.|.:...|:. |
  Fly   771 LERSSRLDRHSVVVL--------LKLLLGSGFYPQLAISDEFNYCKGGGQQFFHTRLKPFVLQ-H 826

  Fly  1158 PSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRL 1219
            |:|       ::..:.||::.|:      :.:.||      |.|:    ..||...|::|.|
  Fly   827 PNS-------QFAKHFELLKLTE------SDLLPK------PDFY----TPKLPLSKRHQLL 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 GH2-like_DHX8 7..74 CDD:409668
S1_DHX8_helicase 285..363 CDD:240189
HrpA 578..>1203 CDD:441249 233/773 (30%)
CG32533NP_728244.1 HrpA 145..>619 CDD:441249 186/489 (38%)
OB_NTP_bind 792..897 CDD:400182 23/98 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.