DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and CG1582

DIOPT Version :10

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_572663.1 Gene:CG1582 / 32021 FlyBaseID:FBgn0030246 Length:1288 Species:Drosophila melanogaster


Alignment Length:1310 Identity:337/1310 - (25%)
Similarity:522/1310 - (39%) Gaps:350/1310 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 VKAKPEKHSETHK--KTDMS----DVDAAMMELEALAPGEGATLVRPHKEVSSRDRHKRRSRDRD 183
            |.|.|:..:..:|  ||::.    :.::..|.::.|....|     |..::....::|.|.|...
  Fly    25 VPAAPKSQAADNKSRKTELHVLRLNDESRQMTMDTLRQIHG-----PEFQLDDISKYKDRGRGGH 84

  Fly   184 TKRRSRSREDRHSDRRRSRSRDKERRRRSRSRDNRRRSRSREDRDRDRDRRHKSSSSRD------ 242
            ..:.|..::       |.....:..:..|.:|.|        |.|.||.||:..:...:      
  Fly    85 GVKHSYWQD-------RGTLVVQSVQGVSSTRGN--------DSDGDRLRRYALAKLENYGFQAV 134

  Fly   243 HHERRRRSRSRSTE-------RRDRRDRSRDCSEKMPPPSAAM----TDDPEA-----GKIYSGK 291
            |........|..||       ||..|....:.....||....:    .|:.||     .|.|..:
  Fly   135 HCLEAYEHCSGDTEAALLLLYRRYMRIPDEEQLTLEPPSEQEILDMRADEKEALESIFDKAYEER 199

  Fly   292 IANIVPFGCFVQLFGLRKRWEGLVHISQLRAE--GRVTDVTEVVTRNQTVKVKVMSITGQKVSLS 354
            .||.|              |.....|..|.|.  ..|....|.|........:......:|..|.
  Fly   200 EANRV--------------WNLKFRIDHLLAHSPSEVRKAREAVLAAAAAAAQAALDKKKKPPLR 250

  Fly   355 MKEVDQDSGKDLNP---LSHAP----EDDESLRD---------------RNPDG---PFSSSTSM 394
            .:..|:|......|   .:|.|    |.|.:.:|               |.|.|   |:.:....
  Fly   251 CRNFDRDGTCKYGPKCRFAHLPQQPTESDTTKKDSVDENDNELWFHVEVRFPPGSRYPYEAPFIY 315

  Fly   395 LNLQGNGMEGDEHESR-----------KRVTRISSPERWEIKQMISS-----GVLDRSEMPDFDE 443
            |....:.:   .||.|           |.:.|...|..:.|..::.|     |.||.|..|.   
  Fly   316 LKTTCHDI---PHELRLRYARHLYKEAKEICRDGIPCVYSICDLLQSNEQLAGRLDTSAFPS--- 374

  Fly   444 ETGLLPKDEDDEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERR 508
                 ||.         .:..:||   :|.|            .|||....|:            
  Fly   375 -----PKR---------SLFYDEP---AGGG------------VNPDAEHHQS------------ 398

  Fly   509 EQKMLQREQEIEAMPTSLNKNWIDPLPE-----DESRSLAANMRGMAAAPPEVPEWKKHVIGGKK 568
                                    |.|.     ..||:...:.|.:.|...|.....:..:..:|
  Fly   399 ------------------------PKPSHYARGQTSRNDGGHQRNVEAQTRENRRLLQQFVERRK 439

  Fly   569 SSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGF----- 628
            ....:|    :::.|:.||.:...:.::..:..:.::::.||||.||:||:.|::.:..|     
  Fly   440 EERYQK----IIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQ 500

  Fly   629 ------TARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGML 687
                  ....:|.||||||::|:.||:|||.|...|:||.|||.||.|:..|..|.:.:.|.|:|
  Fly   501 LPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGIL 565

  Fly   688 LRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFK 752
            ||....:..|.|.:.:::||.|||:..:|.|..:||..:::|.:||:|:.||||:|..||.||..
  Fly   566 LRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGG 630

  Fly   753 APIFTIPGRTFPVEVLY---------------TK-------------EPETDYLDA--------- 780
            ||:..||||||||:.|:               ||             |.|.:|.|.         
  Fly   631 APVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQEILERELEYADVQASGEAPGK 695

  Fly   781 -------------------SLITVMQIHLREP------------------------PGDILLFLT 802
                               |..|...|:|.||                        .|.||:||.
  Fly   696 KIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLP 760

  Fly   803 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSL 867
            |..||.:..:.|.:. ....|...:.|::|::|||..|.|..:|..||.|.||:|::|||||||:
  Fly   761 GFGEIQSVHDSLLDN-ALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSV 824

  Fly   868 TIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDE 932
            |||...:|||.|.:|:|.::|...|:||.:..:|:|.||||.|||||..||....|||...|:..
  Fly   825 TIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYH 889

  Fly   933 MLPTPVPEIQRTNLATTVLQLKTM----GINDL-LHFDFMDAPPVESLVMALEQLHSLSALDDEG 992
            :|..|||||||..|...||::||:    ..|.| :..:.::||..:|::.||.:|..:.|||.|.
  Fly   890 ILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAED 954

  Fly   993 LLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFN 1057
            .||.||..:|..|::..:.|:::.....||.|.:|||.:.||.::.|..|.:|:..||:.|..|.
  Fly   955 QLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFA 1019

  Fly  1058 QAEGDHLTLLAVYNSW------KNNKFSNAWCYENFVQIRTLKRSQDVRKQ-------------- 1102
            ....||||:|..|..|      .|...|..:..|:|:.:.||:...|::.|              
  Fly  1020 LGNSDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPID 1084

  Fly  1103 --------------LLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAK--------------- 1138
                          |.|:...|.      |.|:..:...:|:..:.|..|               
  Fly  1085 VPRRRKNACDNILTLTGVEQNHN------GDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGA 1143

  Fly  1139 --KDPQE---GYRTLVDSQVVYIHPSS-----ALFNRQPEWVIYHELVQTTKEYMREVTTIDPKW 1193
              ::|..   .::|..|. .|.|||||     ::|  |..::::.|.|:|:..|:|:.:.:....
  Fly  1144 VPREPSHHDLRFKTRGDG-YVKIHPSSVNSQVSVF--QAPFLVFQEKVRTSAIYIRDCSMLPLIA 1205

  Fly  1194 LVEFAPSFFR 1203
            :|.||.|.|:
  Fly  1206 MVLFAGSDFK 1215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 GH2-like_DHX8 7..74 CDD:409668
S1_DHX8_helicase 285..363 CDD:240189 16/79 (20%)
HrpA 578..>1203 CDD:441249 241/779 (31%)
CG1582NP_572663.1 UBA_like_SF 123..154 CDD:473871 4/30 (13%)
RWD_DHX57 175..367 CDD:467661 39/208 (19%)
zf-CCCH 245..272 CDD:459885 6/26 (23%)
HrpA 452..>1075 CDD:441249 212/623 (34%)
OB_NTP_bind 1114..1212 CDD:400182 22/100 (22%)
Blue background indicates that the domain is not in the aligned region.

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