DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and Dhx33

DIOPT Version :10

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_848144.3 Gene:Dhx33 / 216877 MGIID:2445102 Length:698 Species:Mus musculus


Alignment Length:696 Identity:308/696 - (44%)
Similarity:433/696 - (62%) Gaps:32/696 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   534 LPEDESRSLAANMRGMAAAPPEVPEWKKHVI-----GGKKSSFGKKTDLTLVE------------ 581
            :||:.|...|...|     |...|..::.|:     ||..:..|::....|.:            
Mouse     1 MPEEASLPPAKRFR-----PGSCPPGRRVVMLLTAGGGGGAGGGRRQTPPLAQPSASPYREALEL 60

  Fly   582 QRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMS 646
            ||:||||::.|..|:..:.:....::||||||||||||.|||.|.|.:.:|.|..||||||||:|
Mouse    61 QRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAAIS 125

  Fly   647 VAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHER 711
            :|.||::|....||:.||||:||||.||.:|.||::||||||||.:.::.|:.||.::|||||||
Mouse   126 LATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHER 190

  Fly   712 TIHTDVLFGLLKTAVQKRPE-----LKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTK 771
            |||||||||::|||.::|.|     ||:||.|||:|...|||||.:||:..:.||..|:::.|||
Mouse   191 TIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTK 255

  Fly   772 EPETDYLDASLITVMQIHLREPPG-DILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYS 835
            :|:.|||.|:|::|.|||...|.. |||:||||||||:...:...:..:.|....|.:::||:|:
Mouse   256 QPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYA 320

  Fly   836 ALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI 900
            :||...|.|:|..||.|.|||:|:|||||||:||.||.||||.|.||.|.||..:|::.|.|..:
Mouse   321 SLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRV 385

  Fly   901 SQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFD 965
            |:..|.||.|||||...|..||||||..: ::.....||||||.|||:.:|||..|.:.::|.||
Mouse   386 SKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFD 449

  Fly   966 FMDAPPVESLVMALEQLHSLSAL---DDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEIL 1027
            ||..|..:.:..|:.||..|.||   ||:..||.:||:||.|||||..:|.:::|....|::|||
Mouse   450 FMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEIL 514

  Fly  1028 TIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRT 1092
            ||||:|||.:|.|.|..::......:.||..:||||:|||.:|.::||...:..||.||||..:.
Mouse   515 TIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKN 579

  Fly  1093 LKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIH 1157
            :....:||.||..|..:..:.::|:..:...:::.:....|.|.|:......|.|....|.|.||
Mouse   580 MLLVAEVRAQLREICLKMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIH 644

  Fly  1158 PSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFR 1203
            |||.||:.:|..|:|..|:.|.|.|||::..:|.:||.|.||.:||
Mouse   645 PSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 GH2-like_DHX8 7..74 CDD:409668
S1_DHX8_helicase 285..363 CDD:240189
HrpA 578..>1203 CDD:441249 295/645 (46%)
Dhx33NP_848144.3 Required for nucleolar location. /evidence=ECO:0000250|UniProtKB:Q9H6R0 1..71 18/74 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..50 4/20 (20%)
HrpA 64..>534 CDD:441249 239/470 (51%)
DEAH box 185..188 2/2 (100%)
HA2, required for interaction with EIF3G and RPL26. /evidence=ECO:0000250|UniProtKB:Q9H6R0 462..553 41/90 (46%)
Critical for rDNA-binding 536..550 4/13 (31%)
OB_NTP_bind 611..688 CDD:400182 29/76 (38%)
Blue background indicates that the domain is not in the aligned region.

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