DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and ddx-15

DIOPT Version :10

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_741147.1 Gene:ddx-15 / 175771 WormBaseID:WBGene00018967 Length:739 Species:Caenorhabditis elegans


Alignment Length:697 Identity:342/697 - (49%)
Similarity:465/697 - (66%) Gaps:33/697 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 DESRSLAANMRGMAAAP--PEVPEWKKHV--IGGKKSSFGKKTD-------LTLVEQRQSLPIYK 590
            |..||.....|..:.:|  ...|:.|:.:  :|..|.......:       ..:.|:|..||:::
 Worm    16 DRRRSPNRRSRSRSRSPHRRSSPDRKRQIGAVGNMKIQINPYNNQPFSNRYWAIWEKRSQLPVWE 80

  Fly   591 LRDDLIKAVTDNQILIVIGETGSGKTTQITQYL---------GECGFTARGKIGCTQPRRVAAMS 646
            .::..::.:.:||.:.::|||||||||||.|:.         |:....|| .:.|||||||||||
 Worm    81 YKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR-LVACTQPRRVAAMS 144

  Fly   647 VAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHER 711
            ||.|||||....|||||||:||||||.|..|::||.||||||||.:....|..|.|::|||||||
 Worm   145 VATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHER 209

  Fly   712 TIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETD 776
            |:.||:|.||:|..|:.|.::|:::.||||||.||.:||...|:.::||||||||:.:|...|.|
 Worm   210 TLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKD 274

  Fly   777 YLDASLITVMQIHL-REPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSE 840
            ||:|::.||:|||: .|..|||||||||||||:.||:.:...:::||.|...|..:|:||.||..
 Worm   275 YLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPA 339

  Fly   841 MQTRIFDPAP------AGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTP 899
            .|.|||:|||      |.|||.||:||||||||||||:.:|:||||.||||||.:..::||:|.|
 Worm   340 AQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCP 404

  Fly   900 ISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHF 964
            ||:|:|.|||||||||.|||.:|||||.||..||.....|||.|:||.:.|||||.:|..||:||
 Worm   405 ISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHF 469

  Fly   965 DFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTI 1029
            ||||.|..|:|:.|||.|:.|.|::|:|.||.||..||||||:|.|:||||.|..|.||:|||:|
 Worm   470 DFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSI 534

  Fly  1030 VSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLK 1094
            .:||||...:.||.:.:..||:.||:|...:|||||||.||:|:|.|:....|||:||:..||:|
 Worm   535 TAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMK 599

  Fly  1095 RSQDVRKQLLGIMDRHKLDVVSAGKNS----VRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVY 1155
            .:..||.||..:||::.|..||....|    :.|:||:.:|||...|..:....|.|:.|:|:|.
 Worm   600 TADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVN 664

  Fly  1156 IHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFF 1202
            :|||:.| :.:|||.:|:|.|.|||.::|.||.:.|:||::.||.::
 Worm   665 LHPSTVL-DHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYY 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 GH2-like_DHX8 7..74 CDD:409668
S1_DHX8_helicase 285..363 CDD:240189
HrpA 578..>1203 CDD:441249 333/645 (52%)
ddx-15NP_741147.1 HrpA 74..>707 CDD:441249 329/634 (52%)
Blue background indicates that the domain is not in the aligned region.

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