DRSC/TRiP Functional Genomics Resources

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Protein Alignment pea and dhx32

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:XP_031762010.1 Gene:dhx32 / 100495407 XenbaseID:XB-GENE-982113 Length:747 Species:Xenopus tropicalis


Alignment Length:680 Identity:229/680 - (33%)
Similarity:376/680 - (55%) Gaps:40/680 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGE---CGFTARGKIGCTQPR 640
            |:::|:.|||:|.:.|.::.::::|:::|.....|||::||.|:..|   .|....|.:.|||..
 Frog    57 LLKEREDLPIWKAKYDFLERLSNSQVVVVSAGPKSGKSSQIPQWCAEYCLAGHYQHGAVVCTQAH 121

  Fly   641 RVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIML 705
            :..|:.:|.|||:|....:|.||||.:.||:|.:.|||.:|.||.|||||.:....|.||.|:::
 Frog   122 KQTAVWLAMRVADEMDVNIGHEVGYIVPFENCCTSETIFRYCTDEMLLREMMSSPLLSSYGVVII 186

  Fly   706 DEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYT 770
            |:.:||::.||||...||.....|||||:::.:....:.....|:..||:.... ....||.:||
 Frog   187 DDVYERSVSTDVLLSCLKVIAVSRPELKVVIITCPALSGTLVSYYGNAPLVETE-NMHSVESVYT 250

  Fly   771 KEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVY- 834
            .....||..::|..:.:||..:..|||::||..:|||..|.|.:.:....:.|::.||:.:.:| 
 Frog   251 TSIPRDYFHSTLRLLFEIHHTKEQGDIVVFLACEEEIKRAYEHIKQEALHMNPELGELVPIALYP 315

  Fly   835 -----SALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDS 894
                 ..:|.|   .:.|.:.:..||||:.|::.|:.:.:..|.:|:|.|..::||||::...:|
 Frog   316 NQSISDYIPYE---ELDDNSKSPKRKVVLTTSLGESLIWMKNILFVIDVGIERRKVYNTRIRAES 377

  Fly   895 LVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGIN 959
            .|..|||:..|:.|.........||.:.||.| .:..||.|....:::..||.:.||.||.|.|.
 Frog   378 HVTQPISKVRAEMRKHILSSYSKGKLFCLYPE-DFAHEMKPFLTAKVEECNLISMVLFLKRMDIA 441

  Fly   960 DLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSD 1024
            .|.|.||::.|..|||:.|||.|..|:|||::|.|:..|..|:||||:|.|||.::.:....|.|
 Frog   442 GLAHCDFINRPDPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILAACEFDCVD 506

  Fly  1025 EILTIVSMLSVQNVFYRPKDKQALADQ----KKAKFNQAEGDHLTLLAVYNSWKNNKFSNA---- 1081
            |:||:.:|::..|.|.   |....|::    :|.||:..||||.||:.:||.::..|.|||    
 Frog   507 EMLTLAAMVTAPNCFI---DSSPEAEELILIRKGKFSHPEGDHFTLINIYNEYEQMKRSNASQYD 568

  Fly  1082 ---WCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVS----AGKNSVRIQKAICSGFFRNAAKK 1139
               ||.::.:....::.::.:|.:|..||.|.:|.:.:    :.:|.:.|:|::.||:|...|:.
 Frog   569 VEKWCQDHCLSFLAMEMARAIRNELADIMRRIELPLTAPAFGSEENVINIKKSLLSGYFMQIARD 633

  Fly  1140 -DPQEGYRTLVDSQVVYIHPSSALFN--RQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSF 1201
             |....|..|...||..:||.|. ||  :.||||:|||...:.:..:|.|:.|.|...:||.|.:
 Frog   634 VDGLGNYIMLTHKQVGQLHPDSG-FNGAKVPEWVLYHEFSVSERSCIRIVSEISPNMFMEFVPPY 697

  Fly  1202 FRFSD--PTKLSKFKKNQRLEPLYNKYEEP 1229
            : ||:  |::..:..:..:..| .:..|||
 Frog   698 Y-FSNLPPSETKELLQQHQTVP-SSPAEEP 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189
HrpA 573..1221 CDD:224557 225/670 (34%)
dhx32XP_031762010.1 HrpA 37..695 CDD:224557 221/646 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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