DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pea and dhx16

DIOPT Version :9

Sequence 1:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster
Sequence 2:NP_001116881.3 Gene:dhx16 / 100127179 XenbaseID:XB-GENE-480525 Length:1033 Species:Xenopus tropicalis


Alignment Length:1225 Identity:475/1225 - (38%)
Similarity:669/1225 - (54%) Gaps:237/1225 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ELDNHLGINDKDLAEFIIDLENKNRTYDTFRKALLDNGA--------EFPDSLVQNLQRIINLMR 75
            :|.:.||::|:.:|:|::....::.:.......|.|.||        .|.:.|...:.|...:.|
 Frog    11 QLHDVLGMSDRHVAQFLVGTALRSTSATDLLVRLRDTGAIDVTEKVKGFLEQLWLKIPRKAPIER 75

  Fly    76 PSRPGGASQEKTVGDKKEDKKSQLLKMFPGLALPNDTYSKKEESDDDEKVKAKPEKHSETH---- 136
            |:|  .|.:|.....:|                 |.:|:..|:|:::||...|.||..:.|    
 Frog    76 PAR--AAEREALAMQEK-----------------NRSYALLEDSEEEEKTDHKEEKRKKKHLRKR 121

  Fly   137 KKTDMSDVDAAMMELEALAPGEGATLVR-PHKEVSSRDRHKRRSRDRDTKRRSRSREDRHSDRRR 200
            :|.:.||           :..|.|...: |..:.:|.|..     :::...|.:..|:|.:...|
 Frog   122 RKEESSD-----------SENENAQTTKVPSPQKTSEDED-----EKEELARLKDLEERDAFAER 170

  Fly   201 SRSRDKERRRRSRSRDNRRRSRSREDRDR--DRDRRHKSSSSRDHHERRRRSRSRSTERRDRRDR 263
            .:.||||:.|....|.:::.....:.|.:  :.||:....      |.|::||.....:|::   
 Frog   171 VKKRDKEKTRNIVERSDKKAYEEAQKRLKLAEEDRKKMIP------ELRKKSRREYLNKREK--- 226

  Fly   264 SRDCSEKMPPPSAAMTDDPEAGKIYSGKIANIVPFGCFVQLFGLRKRWEGLVHISQLRAEGRVTD 328
                 ||:....|.:.|:..                .||:                       .:
 Frog   227 -----EKLEDLEAEIADEEY----------------LFVE-----------------------PE 247

  Fly   329 VTEVVTRNQTVKVKVMSITGQKVSLSMKEVDQDSGKDLNPLSHAPEDDESLRDRNPDGPFSSSTS 393
            :|.|..:....|.:|..:..:......||..:...:...|       :|:...:.||        
 Frog   248 LTSVEQKELEYKRRVRDLAKEYKKAGDKERMEKHDRYFMP-------EENRSKKIPD-------- 297

  Fly   394 MLNLQGNGMEGDEHESRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEETGLL-----PKDED 453
                     ..:|..|.:|........|||                  :|..|..     .||..
 Frog   298 ---------RYEEPMSEERFAPREEQRRWE------------------EEHIGAASLRFGAKDAH 335

  Fly   454 DEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQE 518
            |....|.:.|.||                     |.......:|.|:..:.||....::|...:.
 Frog   336 DHGKKEYDFVMEE---------------------NEVIQFVSSAQMKGTIDKEEENSEVLSESER 379

  Fly   519 IEAMPTSLNKNWIDPLPEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQR 583
                                                                  ||  |::.|.|
 Frog   380 ------------------------------------------------------KK--LSIQEVR 388

  Fly   584 QSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARG-KIGCTQPRRVAAMSV 647
            :|||::..|.||::|::|:||||:.|||||||||||.|||.|.|:|..| |||||||||||||||
 Frog   389 RSLPVFPYRSDLLQAISDHQILIIEGETGSGKTTQIPQYLHEHGYTKNGLKIGCTQPRRVAAMSV 453

  Fly   648 AKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERT 712
            :.||::|.|.:||.||||:||||||||..|::|||||||||||.|.|.:|.|||||::|||||||
 Frog   454 SARVSQEMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVIIIDEAHERT 518

  Fly   713 IHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDY 777
            :||||||||:|...:.|.:||::|.||||:..:||.:|..||:|.||||.:||::.|||.||.||
 Frog   519 LHTDVLFGLIKDIARFRQDLKVLVASATLNTERFSSFFDDAPVFRIPGRRYPVDIYYTKAPEADY 583

  Fly   778 LDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ 842
            |:|.:::|:|||:.:||||||:||||||||:|.||:|.||.:.||..:.|:::||:|:.|||:||
 Frog   584 LEACVVSVLQIHVTQPPGDILVFLTGQEEIETCCEMLQERCRRLGSKIAEMLVLPIYANLPSDMQ 648

  Fly   843 TRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQ 907
            .:||:|.|.|:|||||||||||||||||||.||:||||.|||.||:::||:||:|||.|:|:|.|
 Frog   649 AKIFEPTPPGARKVVIATNIAETSLTIDGIIYVIDPGFCKQKSYNARSGMESLIVTPCSKASANQ 713

  Fly   908 RAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPV 972
            |||||||...||.:||||..||::||..|.|||||||||...||.||::|||||:||||||.||.
 Frog   714 RAGRAGRVAAGKCFRLYTAWAYKNEMEDTTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPH 778

  Fly   973 ESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQN 1037
            |:||:|||||::|.||:..|.||:|||||||.|::|.|||:::.|....||::||||.:||||.|
 Frog   779 ETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKIILASEQYGCSEQILTIAAMLSVNN 843

  Fly  1038 -VFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRK 1101
             :|||||||...||..:|.|....|||:.||.||..|..:..|..||||||:|.|:|:|::|||:
 Frog   844 TIFYRPKDKLVHADTARANFTVPGGDHMVLLNVYTQWVESGHSLQWCYENFIQARSLRRARDVRE 908

  Fly  1102 QLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQ 1166
            ||.|:|.|.::::.|...:|:.::|||.:|:|.:.|:. .:.||:|:...|.|||||:|:|...|
 Frog   909 QLEGLMGRIEIELTSCEGDSIPVRKAITAGYFYHTARL-TRSGYKTVKQQQAVYIHPNSSLHEEQ 972

  Fly  1167 PEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFR---FSDPTKLSKFKKNQR 1218
            |.||||||||.|||||||::..||..||:|.||.:::   ..|||.    ||..|
 Frog   973 PRWVIYHELVFTTKEYMRQIIEIDSTWLLEVAPHYYKSRELEDPTS----KKMPR 1023

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peaNP_610928.1 S1_DHX8_helicase 285..363 CDD:240189 8/77 (10%)
HrpA 573..1221 CDD:224557 383/651 (59%)
dhx16NP_001116881.3 PTZ00121 <88..381 CDD:173412 74/495 (15%)
HrpA 356..1005 CDD:224557 380/705 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D354219at2759
OrthoFinder 1 1.000 - - FOG0000059
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X141
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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